Thermus thermophilus SG0.5JP17-16: Ththe16_1836
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Entry
Ththe16_1836 CDS
T01867
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
tts
Thermus thermophilus SG0.5JP17-16
Brite
KEGG Orthology (KO) [BR:
tts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tts03016
]
Ththe16_1836
Enzymes [BR:
tts01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Ththe16_1836
Transfer RNA biogenesis [BR:
tts03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Ththe16_1836
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Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AEG34230
UniProt:
F6DFH2
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All DBs
Position
complement(1736632..1737228)
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AA seq
198 aa
AA seq
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MRLFYAVFLPEEVRAALVEAQTKVRPFRGWKPVPPHQLHLTLLFLGERPEEELPDYLALG
HRLARLEAPFRARLRGTGYFPNEGTPRVWFAKAEAEGFLRLAEGLRAGVEELLGEEAVRI
PGWDKPFKPHITLARRKAPAPRVPPVLFGLEWPVEGFALVRSELKPKGPVYTVLEKFSLR
GEHGRKQAQGPGERPEGD
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcttctacgcggtctttttacccgaggaggtccgggcggccctggtggaagcc
cagaccaaggtccgcccttttcgcggctggaagcccgtccctccccaccagctccacctg
accctcctttttctgggcgagcggcccgaggaggagcttcccgactacctggccctaggc
cacaggctcgcccgcctcgaggcccccttccgggcgcggcttcgcgggacgggctacttc
cccaacgaaggaaccccccgggtctggttcgccaaggcggaggccgagggtttcctccgc
ctcgccgaggggcttcgcgccggggtggaggagcttctgggcgaggaggcggtgaggatc
cctggctgggacaagcccttcaagccccacatcaccctggcccgcaggaaggccccggcg
ccccgggtgccccccgtcctcttcggcctggagtggccggtggagggcttcgccctggtg
cgctcggagcttaagcccaaggggccggtgtacaccgttttggagaagttttccctgaga
ggtgagcatggacgaaagcaagcgcaaggccctggagaacgccctgaaggcgattga
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