Thermothielavioides terrestris: THITE_129437
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Entry
THITE_129437 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K12855
pre-mRNA-processing factor 6
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
THITE_129437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ttt03041
]
THITE_129437
Spliceosome [BR:
ttt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
THITE_129437
Complex C
U5 SnRNP specific factors
THITE_129437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
PRP1_N
TPR_19
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_16
Suf
TPR_2
HAT_Syf1_CNRKL1_C
TPR_CcmH_CycH
TPR_8
TPR_9
TPR_15
NatA_aux_su
TPR_1
ARM_TT21
TPR_11
ARM_TT21_C
TPR_7
ARM_TT21_2nd
TPR_EMC2
TPR-S
EntA_Immun
Motif
Other DBs
NCBI-GeneID:
11521167
NCBI-ProteinID:
XP_003648601
JGI:
Thite2_129437
UniProt:
G2QWQ5
LinkDB
All DBs
Position
1:complement(join(451445..453854,454001..454462,454816..454906,455133..455146,455214..455374))
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AA seq
1045 aa
AA seq
DB search
MACNELDRRHPRLIGILLANVGILANAGILLASVGILANYYTRMVLSDHLAVNVICHKSI
LGLRASSWVRGHLPGIVGILANAYIFLGSQLDAPLPRRFSLHGWLTRDFANQNPNLRNQD
PRHRSRPQHNMTSRRDFLSQPAPENYVAGLGRGATGFTTRSDLGPAREGPSEDQIKAAVA
KRSAQLGLTEPKDDDIDDDERYQDPDNEVGLFAGGIYEKDDEEADRIWKDVDDKMARRRQ
KQREAREKAEREEYERKNPKIQQQFAGLKRALESVTDEEWANLPDPKDLTGRTKRARQAR
MQRFYAVPDSVLAAARDQGQFGTTVADDGTATDANADGTVTDFAKIGAARDKVLRARLEQ
QSQSSGIATAGSATSIDPKGYLTSLANMQGAEQSIGDIELFRKMLKSAVDSNPKQAASWI
AAARLEIAAGKPGAARTLIAKGCQHCPKSEDIWLENIHLNDNRNAKVIAAQAIQANPHSV
KLWVEAMKLENDPRSRKKVIRRALDHNQESEALWKEAVNLEEDPADARMLLAKATELIPE
SLDLWLALARLETPENARKVLNKAVKKLPNSHELWIAAARLEEQLGEGNKKQVMKSAVRF
LAGRNAMPKREEWIAEAEKCEEEGAVITCSNIIEETLGWGLDEDDDRKEIWMDDAKGSIS
RDKFATARAIYAYALRVFPNSRTLYLAAVDLERNHGTKDDLWRALEKAVEACPHVEAFWL
MLAKEKAGEINEARRVLARAFKQNPDNEDIWLAAVKLEADNGFIDQARDLLKTARQNAPT
DRVWMRSVAFERQLGANEAALDLVQDALQLFPAAPKLWMMKGQIYEDLGKVPQAREAYST
GVRAVPSSVPLWLLYSRLEERSGNVVKARSVLDRARQAVPKSPELWTELIRVERRAGNTN
QAKSLMASALQQMPKSGLLWAERILHLEPRTQRKSLITEAIKKVEDDAVLQVTAARILWA
ERKLDRAQNWFERALLLDRDLGDTWAWYYRFLSQHGTDEKRAELVAKCVLNDPRHGEHWQ
AVAKDPKNAGKSTEEILKLVAASLA
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtaacgagcttgatcgtaggcatcctaggcttataggcatcctcctagccaac
gtgggcatcctagccaacgcgggcatcctcctggctagcgtaggcatcctagccaactat
tatacgcggatggtcctcagtgaccatctggcggtaaatgttatatgtcacaaaagcatc
ctgggcttgcgggcatcctcctgggttcgcgggcatcttcctgggattgtgggcatcctg
gccaacgcgtacatcttcctgggttcgcagctcgatgcgccgttgcctcgccgcttttcc
ttgcatggctggctgactcgcgactttgcgaaccagaacccaaatcttcgaaatcaagat
cctcgacaccgatcgagaccacaacacaacatgaccagcaggcgcgacttcctcagccaa
ccggcgcccgagaactacgtggccggcctcggtcgtggtgctacgggctttacaacaagg
tccgacctcggccctgcgcgcgaaggccccagtgaggaccagatcaaggccgccgtcgcc
aagcggtccgcccagctcggcctgaccgagcccaaggacgacgatattgacgatgacgag
cggtatcaggaccccgacaacgaggttgggcttttcgctggcggcatctacgagaaggac
gacgaagaagctgatcggatatggaaagacgtcgacgacaagatggccaggcgccgccag
aagcagagggaagcacgagagaaggccgaacgcgaggaatacgaacgcaagaaccccaag
atccagcaacagttcgccgggctcaaacgagcgctggagtcggtgaccgacgaggagtgg
gcgaacctgccggaccccaaggacctgacggggcggacgaagagggcccgccaagcccgc
atgcagcgcttctatgccgttcccgacagcgtcctcgctgccgcccgagatcagggacag
ttcggcaccaccgttgccgacgacggcaccgccaccgatgccaatgcggacggtaccgta
accgacttcgcaaagatcggcgccgcccgggacaaagtgctccgggcgcgcctcgaacag
cagtcgcaaagcagcggcatcgccacggccggaagcgcgacaagcatcgaccccaagggc
tacctgacctccttggcgaatatgcaaggcgccgagcagagcatcggggatatcgagctg
ttccgaaagatgctgaaatcggccgtcgactccaacccgaagcaagcggcaagctggatc
gccgccgccagactggagatcgccgccgggaagcccggtgcggcccgtaccttgatcgcc
aagggctgtcaacactgtcccaagagcgaggatatctggctcgaaaacatccacctcaac
gacaaccgcaacgctaaagtcatcgcggcgcaagcgattcaggccaacccgcactcggtg
aagctctgggtggaggccatgaagctggagaacgatccgcgctcccggaagaaggtgatc
cggcgagcgttggatcacaaccaggagtccgaggcgctgtggaaggaagccgtcaacctc
gaggaggaccctgcggatgcgcggatgctgctcgccaaggccacggaactcatccccgag
tcactcgacctgtggctggcactggcgcgcctcgagaccccggaaaacgcccgcaaggtg
ctgaacaaggcggtcaagaagctcccgaactcgcacgaactgtggattgccgccgcccgc
ttggaggagcagctcggcgagggcaacaagaagcaggtgatgaagagcgccgtcaggttc
cttgccggacggaacgcgatgccgaagcgcgaggagtggatcgcggaggccgagaagtgc
gaggaggaaggcgccgtcatcacgtgcagcaacatcatcgaggagaccctcggctggggc
ctggacgaggacgacgaccggaaggagatatggatggacgatgccaagggcagcatcagc
cgcgacaagtttgcgaccgcccgtgccatctacgcctacgcgctgcgggtgttccccaac
agcaggaccctctacctcgccgcggtcgatctcgagcgcaaccacggcaccaaggacgat
ctctggcgggcgctcgagaaggccgtggaggcgtgtccgcacgtcgaagccttctggctc
atgctcgccaaggagaaggccggcgagatcaacgaggcccgccgcgtgctggcccgggcg
ttcaagcagaacccggacaacgaagacatctggctggccgcggtcaagctggaagcggac
aacggcttcatcgaccaagcacgagacctcctcaagacggcgcggcagaacgcgccgacc
gaccgcgtctggatgcgcagcgtagccttcgagaggcagctgggcgccaacgaggcggcg
ctggacctggtgcaggacgcgctccagctcttccccgcggcgcccaagctgtggatgatg
aagggccagatctacgaggacctcggcaaggtgccacaggcccgggaagcgtacagcacg
ggcgtgcgggcggtaccgtcgtcggtgccgctctggctgctgtactcgcggctagaggag
cggtcaggcaacgtggtcaaggcgcgcagcgtgctcgaccgggcgcggcaggcggtgccc
aagtcgcccgagctctggaccgagctcatccgggtggagcggcgggcgggcaacacgaac
caggccaagagcctgatggcgagcgcgctgcagcagatgcccaagagcgggctgctctgg
gcggagcggatcctgcacctggagccgcgcacgcagcgcaagtcgctcatcaccgaggcc
atcaagaaggtcgaggacgacgcggtgctgcaggtgacggcggcgcgcatcctgtgggcc
gagcgcaagctggaccgcgcgcagaactggttcgagcgcgccctgctgctcgaccgcgac
ctgggcgacacctgggcctggtactaccgcttcctgtcgcagcacggcaccgacgagaag
cgggccgaactcgtggccaagtgcgtgctgaacgacccgcgccacggcgagcactggcag
gctgtcgccaaggaccccaagaacgccggcaagagcaccgaggagatcctcaagctcgtc
gcggcgtctctggcctga
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integrated database retrieval system
