Thermothielavioides terrestris: THITE_2042530
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Entry
THITE_2042530 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K03679
exosome complex component RRP4
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THITE_2042530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2042530
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
THITE_2042530
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
THITE_2042530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
RRP40_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
11523432
NCBI-ProteinID:
XP_003650893
JGI:
Thite2_2042530
UniProt:
G2QUK2
LinkDB
All DBs
Position
1:complement(9148865..9149926)
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AA seq
353 aa
AA seq
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MPITILAPKFSRPVNAREDDVSSISSSDSEDGGAALDGDIAMTRPPKRARLATSLATSDI
VTPGELITDDPQWMRGHGTYATPGTATIVSSVAGTISRTNKLLSVRPLRARYTPEVGDLV
VGRIVEVQARRWRVDVGSTQLAALPLSAINLPGGILRKRTETDELQIRTFFAEGDLLVAE
VQQLFADGGAVLHTRSLKYGKLRNGVFVAVSGMGGGGGVVRSRRQVWTMEAANGGGQIDV
VLGVNGYVWISKHVETPEGENKAVGITSMEESVSANMYSSQNDRIEVQTMREIARLRGVV
TALVENGLRVDEDMVVRGYHEAVEMAMLSADGADDIYLGGERGEQLAAALTGA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcacaatcctcgcccccaagttctcccggccggtaaacgcccgggaggacgat
gtctcctcgatctcctcatccgactccgaagatggcggtgccgcgctcgacggcgacatc
gccatgacccggccgcccaaacgggcccgcctcgccacctccctcgcaacaagcgacatc
gtcacgccgggcgagctgatcaccgacgacccgcaatggatgcgcgggcacgggacgtac
gccacgccggggacggcgacgatcgtctcgtcggtggccggcacgatcagccggaccaac
aagctgctgtcggtgcggccgctgcgggcgcggtacacgcccgaggtgggcgacctggtg
gtggggcggatcgtggaggtgcaggcgcggcggtggcgggtggacgtggggtcgacgcag
ctggcggcgctgccgctcagcgcgatcaacctgccgggcggcatcctgcgcaagcgcacc
gagacggacgagctgcagatccgcaccttcttcgccgagggcgacctgctggtcgccgag
gtgcagcagctgttcgccgacggcggcgccgtgctgcacacccgctcgctcaagtacggc
aagctgcgcaacggcgtcttcgtcgccgtcagcggcatgggcggcggcggcggcgtggtc
cgcagccgccgccaggtgtggaccatggaggcggccaacggcggcggccaaatcgacgtt
gtgctgggcgtcaatgggtacgtctggatcagcaagcacgtggagacgcccgagggggag
aataaggcggtgggcatcacgagtatggaggagagcgtgagcgcgaacatgtactcgagc
cagaacgatcggatcgaggtgcagacgatgagggagattgcgaggctacgcggggtggtg
acggcgctcgtggaaaacgggctgcgcgtggatgaggatatggttgtcagggggtatcac
gaggccgtggagatggctatgttgtcggccgacggcgcggatgatatctacctcggcggc
gaaaggggggagcagttagctgcggcgctaacgggggcgtga
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