Thermothielavioides terrestris: THITE_2106580
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Entry
THITE_2106580 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03013
Nucleocytoplasmic transport
ttt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
THITE_2106580
03015 mRNA surveillance pathway
THITE_2106580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2106580
Enzymes [BR:
ttt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
THITE_2106580
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
THITE_2106580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
CMS1
AAA_22
PG_binding_5
Motif
Other DBs
NCBI-GeneID:
11521475
NCBI-ProteinID:
XP_003648770
JGI:
Thite2_2106580
UniProt:
G2QQM4
LinkDB
All DBs
Position
1:complement(join(1106458..1106937,1107005..1107242,1107311..1108017))
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AA seq
474 aa
AA seq
DB search
MADLASRISKPSDAPASDAPAPAEGNGTEQPIDDGLNRGLIESSYDVEVKLSDLQNDTDN
PLASGVSSFEELGLSKQINDGLLAMNFKKPSKIQEKALPLMLSNPPRNMIAQSQSGTGKT
AAFVLTVLSRVDFTQPTQPQALLLAPSRELARQIQGVIKTIGQFCENLIVEAAIPGSISR
ETGVKASAVVGTPGTVLDLVRRRQFDVSKLKVLVIDEADNMLDQQGMGDQCLRVKNMLPK
NIQTLLFSATFPDKVMNYARKFAPNANEIKLRHQDLTVKGISQMYMDCPDESKKYDILCK
LYGLMTIGSSVIFVKTRESANEIQRRMEADGHKVSVLHGAYEGQNRDALLDDFRSGRSKV
LITTNVLARGIDVSSVSMVINYDIPMKGPGDREPDAETYLHRIGRTGRFGRVGVSISFVY
DRKSFEALSQIADWYQIDLVQLSPDDWDLTEKKVQDVIKSSRARPEYAPSALGN
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctggccagccgcatctccaagccgagcgacgcgcccgccagcgacgcgccc
gcccctgccgagggcaacggcaccgagcagccgatcgacgatgggcttaacagaggtctc
atcgagtcgtcgtatgacgttgaggtgaagctgagcgacctgcaaaacgacaccgacaat
ccgctggcctcgggcgtctcctccttcgaagagctcggcctttccaagcagatcaacgac
ggcctcttggctatgaacttcaagaagccctccaagatccaggaaaaagccctgcctctc
atgctcagcaacccgccgcgcaacatgatcgcccagtcgcagtcgggcacgggcaagacg
gccgccttcgtgctcaccgtcctgtcgcgcgtcgatttcacccagcctacgcagccgcag
gcgctgctcctggcgcccagcagagagctggcgcgccagatccagggcgtcatcaaaacg
atcggccagttctgcgagaacctgatcgtcgaggcggccatccccggctccatttcgcgc
gagacgggcgtcaaggccagcgcggtggtgggaacgccgggcaccgtcttggacctggtc
cgccgccgccagttcgacgtgtcaaagttgaaggtcctggttattgacgaggccgacaac
atgctggaccagcaaggcatgggcgaccagtgtctccgggtcaagaatatgctcccgaag
aatatccaaactctcctgttctcggccaccttccccgacaaggtcatgaactatgcccga
aagttcgcgccgaacgcgaacgagatcaagctccgccaccaggacctcacggtcaagggc
atttcccagatgtacatggactgcccggatgagagcaagaagtacgacatcctctgcaag
ctctacggtcttatgaccattgggtcatccgtcatctttgtcaagacgcgcgaaagtgcc
aacgagattcagcggcggatggaggccgacggacacaaggtctcagtgctacacggcgcg
tacgagggccagaaccgcgacgctctcctcgacgatttccggtccggccggtccaaggtg
ctcatcaccaccaacgtcctggcgcgcggcatcgacgtttccagcgtgtccatggtgatc
aactacgacatccccatgaaggggcccggggatagggagcccgatgccgagacgtacctc
caccgtatcggccgcaccggccgcttcgggcgcgtcggagtcagcatcagcttcgtctac
gaccgcaagagcttcgaggcgctctcgcagatcgccgactggtaccagatcgacttggtg
cagctgagcccggacgactgggatctcacggagaagaaggtgcaggacgtcatcaagtcg
agccgagcgcgccccgagtacgcacccagtgcgctcggaaactga
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