Thermothielavioides terrestris: THITE_2107255
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Entry
THITE_2107255 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ttt
Thermothielavioides terrestris
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2107255
03041 Spliceosome [BR:
ttt03041
]
THITE_2107255
03036 Chromosome and associated proteins [BR:
ttt03036
]
THITE_2107255
Enzymes [BR:
ttt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
THITE_2107255
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
THITE_2107255
mRNA cycle factors
Common to processing body (P body) and stress granule
THITE_2107255
Spliceosome [BR:
ttt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
THITE_2107255
Chromosome and associated proteins [BR:
ttt03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
THITE_2107255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Utp25_C
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
11515402
NCBI-ProteinID:
XP_003649075
JGI:
Thite2_2107255
UniProt:
G2QTC2
LinkDB
All DBs
Position
1:join(2084456..2084682,2084762..2086535)
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AA seq
666 aa
AA seq
DB search
MADQLSGSMGNLSLDSAPPAAQLSNQQPVTRSYIPPHLRAKMAAANAPPANGPPMGPGPM
NGPGPVNGLNNSAWAGNNNFDVRAGGGNWGAYDQSPHPWGGRQGGFNRNAYRGPASGGGG
AMGGGAGRGEGRWIDGKHVIGSGDPRLERELFGTADDPSKQHTGINFEKYDDIPVTPSGR
DVPEPILTFSNPPLDPHLLSNIELARYKIPTPVQKYSIPIVINGRDLMACAQTGSGKTGG
FLFPILHQSFTQGPSPVPAQGGGYGRQRKAYPTALILAPTRELVSQIYDEARKFAYRSWV
RPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDM
GFEPQIRRIVQGEDMPPTGQRQTLMFSATFPRDIQMLAQDFLSDYVFLSVGRVGSTSENI
TQKIEYVEDIDKRSVLLDILHTHAGGLTLIFVETKRMADSLSDFLINQNFPATSIHGDRT
QRERERALELFRNGKCPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAG
NTGIATAFFNRGNRGIVRELIDLLKEANQEIPSFLETIARESSYGGGRGGRGGGRGRGRG
GNTDFRKYGGGGGGFGGGFGGPQHSSGGGGGYGGYGGPQSGGYGGGYGGYGGGYGNPGGA
GGQSWW
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaactcagcggcagcatgggcaatttgtccctcgactcggctcccccggcc
gctcagctctcgaaccagcagccggtcactcgttcctacatccccccccacctgcgcgcc
aagatggctgctgccaatgctccccccgccaacggtcctcccatgggccctgggccgatg
aacggcccgggtcccgtgaatggcctcaacaacagtgcttgggctggcaacaacaacttc
gacgtgcgtgccggtggcggcaattggggcgcctacgatcagtccccgcacccttggggc
ggccgtcagggtggcttcaaccgcaatgcgtaccgtggccctgccagcggtggcggtggt
gccatgggcggcggcgcgggccgtggcgagggccggtggattgacggcaagcacgttatc
ggcagtggcgaccctcgcctggagcgcgaactcttcggcaccgccgacgatccgagcaag
cagcacaccggcattaacttcgagaagtacgacgacattccggtcaccccctccggccgt
gatgtgccggagcccatcctgaccttcagcaaccctccgctggaccctcacctgctctcc
aatattgagctcgcccgctacaagatccccaccccggtccagaagtattccatccccatc
gtcatcaacggccgcgatctgatggcttgcgcccagacgggttccggcaagactggcggt
ttcctgttccccattctgcatcagtctttcacccagggtccctcccccgttcccgcccag
ggcggcggatacggccgtcagcgcaaggcttaccccactgccttgattctcgcgccgact
cgtgagctggtgtcccagatctatgacgaagcccgcaagttcgcctaccgctcttgggtt
cgcccctgcgtcgtctacggtggtgccgatatcggctctcagctccgtcagatcgaacgc
ggctgcgatctgcttgttgctacgccgggcagacttgtcgacctcatagagcgtggtcgc
atctcgctttgcaacatcaagtacctcgtgctggacgaggccgaccgcatgcttgacatg
ggtttcgagccccagattcgccgcatcgtccaaggcgaggacatgcctcctaccggtcag
cgccagacgctcatgttctcggccaccttcccgcgcgacattcaaatgctcgcccaggac
ttcctgagcgactatgtcttcctctctgtcggccgtgttggctcgacctcggagaacatt
acgcagaagatcgagtacgtcgaagatatcgacaaacgctctgttctgcttgatatcctc
catacccacgccggcggtctcaccctcatcttcgtcgagaccaagcgcatggccgactcc
ctgtcggacttcctgatcaaccagaatttcccggccacctcgatccatggtgaccgcacc
cagcgtgagcgcgagcgtgccctggagctcttccggaacggcaagtgcccgattcttgtt
gccacggccgtcgccgcacgtggcctcgacattccgaacgtcactcacgtcatcaactac
gacctccccactgacattgacgactacgttcaccgcattggtcgtaccggccgtgccggc
aatacgggtatcgccactgccttctttaaccgtggcaaccgcggtatcgtccgggagttg
atcgacctgctcaaggaggctaaccaggagattccttccttccttgagaccattgctcgc
gagtcgtcctatggtggtggccggggcggtcgcggcggcggtcgcggtcgcggccgtgga
ggtaatacagacttccgcaagtatggcggcggcggtggcggcttcggcggcggtttcggc
ggtcctcagcacagctctggcggcggcggtggctacggtggctacggcggtccccagagt
ggcggttacggcggcggctacggcggctacggtggcggctacggcaatcccggtggtgcc
ggcggccagtcctggtggtaa
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