Thermothielavioides terrestris: THITE_2108187
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Entry
THITE_2108187 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K18752
transportin-1
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
THITE_2108187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2108187
03009 Ribosome biogenesis [BR:
ttt03009
]
THITE_2108187
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
THITE_2108187
Ribosome biogenesis [BR:
ttt03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
THITE_2108187
Pre-60S particles
THITE_2108187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_EF3_N
HEAT_GCN1
TOR1L1_N
HEAT_2
TPR_IMB1
TPR_DNAAF5
TPR_IPO5
MMS19_C
Vac14_Fab1_bd
Cnd1
HEAT_GCN1_C
IBN_N
Arm
Exportin-5
VPS15-like_hel
GNC1_N
Motif
Other DBs
NCBI-GeneID:
11515560
NCBI-ProteinID:
XP_003649568
JGI:
Thite2_2108187
UniProt:
G2QXW4
LinkDB
All DBs
Position
1:complement(join(4016922..4017023,4017109..4019742,4019849..4019950))
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AA seq
945 aa
AA seq
DB search
MDWRPNEESLRTLAACLKDSLSGFNKAAQKQAEIMLSQAKANPDINNYLAYIFSSPEPPA
GLALPPNDWHLVRSSAAIMLKNNIKSNYKQIPETSIALIKLAVPLGIQDQNSQIRNYAGN
IATEMVRRGGLYSWPELLQDLLKLLSNESGQVSNEAQEGAMAAMAKICEDNTKLLEREHN
GQRPLNFMLPKFIQATKSPLPKVRTYALTAINVFTPRKSQAMLNSIDDLLQHLFFLSEDP
VADVRRQVCRAFVRLVETRPDKLLPHLDGLVEYILTQQQGDDEDLACEAAEFWLSVGEHD
DLWRNLEPYIQKIIPVLLQCMVYSPEDIAVLGGESDDEDEEDKEQDIKPQFAKKNLKRGA
GAGAEGSAEASQNGHAYEKLASMDDDLEEGEIDELDEEDGGDENPDEKWTLRKCSAAALD
VFATDFGGPVFNSILPYLQTNLKHQDWPCREAAVLALGAVAEGCMDVVVPHLPELIPYLI
SLLDDPEPVVRTITCWTLGRYSAWAANLRDPAQQQTYFVPLMDGILRKMVDKNKKVQEAG
ASAMANLEEKAGKHLEPFCGPIIQQYVLCFNKYKDKNRWILYDCVQTLAEHIGPVLARPE
LCGQLMPALIDRWQKVPDQSREMFPLLECLSYVAIALGDAFTPYAEPIFARCVNIIHQNL
EQTLAANNNPELDQPDKDFLVTSLDLLSAIIQALDNAKAVALVKNSQPAFFELLSFCMED
PADEVQQSAYALLGDCAKFVFEQLEPFLPSILPILLKRLDLENILDEEIDSSFSVVNNAC
WSAGEIAMQYKKGMAPFAQELLQRFLEIISNPGVPPGVNENAAIALGRLGLDNYDILAPH
LPKFSEEFLRAMDDIDPTEEKATAFKGFGIVVAHNPQAMEKDLLRFFTSIARYRDLKLQN
PIKQELHEVLQNVLNIYRQLIPQFNDFVAQLQPQDQQALKATYVL
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggattggcggcccaacgaggagtccttacggactcttgccgcctgtctcaaggattcg
ctgagcggcttcaacaaggctgcgcaaaaacaggccgaaattatgctctcacaagcgaaa
gccaacccggacatcaacaattacttggcttacattttctcgagccccgagccgcctgcc
ggcctggccctgccgcccaatgattggcacctggtgcgctcgtcggccgccatcatgctc
aaaaacaatatcaagtcgaattacaagcagatccccgagaccagcatagcgctgatcaag
cttgccgtcccgctgggcatccaggaccagaactcccagatccgcaattacgcaggcaac
atcgcgaccgagatggtccgccgcggcggcctgtacagctggcccgagctgctgcaggac
ctgttgaagttgctgagcaacgagtccggccaagtgtcgaacgaggcccaggagggcgcc
atggccgccatggccaagatatgcgaggacaacaccaagctgctggagcgggaacacaac
ggccagcggccgctcaactttatgctccccaagttcatccaggcgaccaagagcccgttg
cccaaggtccgcacctatgcgctgaccgcaatcaacgtcttcacgcccaggaaatcgcag
gccatgctgaattccatcgacgacctcctccaacatctcttcttcctctccgaagatccc
gtagccgacgttcgccgccaggtctgccgcgcattcgtccgcctcgtcgagacccgacca
gacaagctcctgccccatcttgacgggctggtcgagtacatcctcacccaacaacaaggc
gacgacgaggacctggcctgtgaggcggccgagttctggctgtcggtcggcgaacacgac
gacctatggcgcaacctggaaccctacatccaaaagatcataccggtgctgctgcagtgc
atggtctacagccccgaggacatcgctgtgctagggggcgaatcggacgacgaggatgag
gaggacaaggagcaggacatcaagccacagttcgccaagaagaatctcaagcgcggcgcc
ggcgccggcgccgaggggtcggccgaggcaagccagaatgggcatgcctacgagaagctg
gcgagcatggacgacgatctggaagagggcgagattgacgagctggacgaagaggacggc
ggcgacgagaatcccgacgagaagtggacgctccgcaagtgctcggccgcagcgctcgac
gtgttcgcgacggattttggcggcccggtgttcaactcgatcctgccatatctgcaaacg
aacctgaagcaccaggactggccctgccgggaggcggccgtgcttgcgctcggcgctgtg
gccgagggctgtatggacgtcgtggtcccccatctccccgaactcataccgtatctcatc
agcctgctggacgatccggagccggtcgtgcggacaataacctgctggacactcgggcgg
tactcggcatgggcggccaacctaagagatcccgcccagcaacagacctacttcgtgccc
ctcatggacggcatcctccggaagatggtcgacaagaacaagaaggtgcaggaggccggc
gcgtcggccatggcaaatctggaggagaaggcagggaaacacctcgagccattttgcggc
cccatcatccagcagtacgtcttgtgtttcaacaagtacaaggacaagaacaggtggatc
ctctacgactgcgtccagacgctggccgagcacattggtcccgtgctggcacggcccgag
ctctgcggccagctgatgcctgctctgatcgaccggtggcaaaaggtgccggatcagtcg
agagagatgttccctctgctggaatgtctgtcgtatgtcgccatcgcccttggcgacgcc
ttcacgccctatgccgagcccatcttcgcgcgctgcgtcaacattatccatcagaacctg
gaacaaaccttggcggccaacaacaaccccgagcttgaccagcccgacaaggacttcttg
gtcaccagcctggatctcctgagcgccatcatccaagcgctcgacaacgcgaaggccgtc
gcgctggtcaagaacagccagcccgccttcttcgagctcttgagcttctgcatggaagac
cctgccgacgaggtgcaacagtcagcctatgcgctcctcggcgactgcgccaagttcgtg
ttcgagcagctggagccgttcctgccctccatcttgcccatcctgctcaagcggctggac
ctcgagaacatcctcgacgaagagatcgacagcagcttcagcgtggtcaacaatgcctgc
tggagcgccggcgagatcgccatgcagtacaagaagggcatggcgccgtttgcgcaggag
ctgctgcagcgcttcctcgagatcatctccaacccgggcgtgccgccgggcgtcaacgag
aacgcggccattgcactgggccggctgggactcgataactacgacattctcgccccacat
ctgcccaagttctccgaagagttcctccgcgccatggacgacatcgacccgaccgaggag
aaggcaacggcgttcaagggcttcggcatagtggtggcgcataacccgcaggcgatggag
aaggacctgctgcgcttcttcacgtcgatcgcgcggtatcgtgacctcaagctgcagaat
cccatcaagcaggaactccatgaggttctgcagaacgtcctcaacatctaccgccagctg
atcccccagttcaatgactttgtcgcgcagctccagccgcaagaccagcaagccctgaag
gccacttatgtgctatga
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