Thermothielavioides terrestris: THITE_2108277
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Entry
THITE_2108277 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K15171
transcription elongation factor SPT4
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
THITE_2108277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttt03021
]
THITE_2108277
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2108277
Transcription machinery [BR:
ttt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
THITE_2108277
RNA polymerase I system
THITE_2108277
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
THITE_2108277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
11515296
NCBI-ProteinID:
XP_003649601
JGI:
Thite2_2108277
UniProt:
G2QQQ5
LinkDB
All DBs
Position
1:join(4141468..4141548,4141628..4141881,4141956..4141986)
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AA seq
121 aa
AA seq
DB search
MSENFVAPGQQRYLRACMVCSIVMTYARFRDEGCPNCEEFLHLQGSPDQIDSCTSQVFEG
LITLVDPAKSWVAKWQRLDGYVRGVYATKVSGQLPDDVRTTLEEEYRITYIPRDGSATEA
D
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaacttcgttgcgcccggccagcagcgctacctgcgcgcctgcatggtctgc
tcgatagtcatgacctacgcccgcttccgcgacgaaggctgccccaactgcgaggagttc
ctgcacctgcaagggtcgccagaccagatcgacagctgcacgtcgcaggtgttcgagggg
ctcatcacgctggtcgacccggccaagtcgtgggtggcgaagtggcagcggctggacggc
tacgtgcgcggcgtgtacgcgaccaaggtgtcgggccagctgccggacgatgtgcggacg
acgttggaggaggagtatcgaatcacatatatcccacgcgatggcagcgcgacggaggcg
gattag
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