KEGG   Thermothielavioides terrestris: THITE_2108460
Entry
THITE_2108460     CDS       T02228                                 
Name
(RefSeq) hypothetical protein
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
ttt  Thermothielavioides terrestris
Pathway
ttt03020  RNA polymerase
ttt03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ttt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    THITE_2108460
  09124 Replication and repair
   03420 Nucleotide excision repair
    THITE_2108460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ttt03021]
    THITE_2108460
   03400 DNA repair and recombination proteins [BR:ttt03400]
    THITE_2108460
Transcription machinery [BR:ttt03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     THITE_2108460
DNA repair and recombination proteins [BR:ttt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      THITE_2108460
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L
Other DBs
NCBI-GeneID: 11521630
NCBI-ProteinID: XP_003649685
JGI: Thite2_2108460
UniProt: G2QRK2
LinkDB
Position
1:join(4609316..4609332,4609973..4610031,4610100..4610210,4610311..4610540)
AA seq 138 aa
MNAPDRFELFLLQEGEKKITEKVVSGMSNTSDFILLKEDHTLGNLLSEHLKMAPHVMMAG
YKIDHPNVPEVLIRVQTDGSITPREALVRVCKQLVAMYGQLGREFQKELTLRQFADQGEN
AGVGGGAAGGVGGGQNGF
NT seq 417 nt   +upstreamnt  +downstreamnt
atgaatgctccggacagattcgagctcttccttctccaagaaggagagaagaaaatcacc
gagaaagtggtgagcggcatgtccaacacgtccgacttcatcctcctcaaggaggaccac
acgctgggcaacctgctcagcgagcacctcaagatggcgccccacgtcatgatggccgga
tacaagatcgaccaccccaacgtgcccgaggtcttgatccgcgtccagaccgacggctcc
atcacgccgcgcgaggccctcgtccgcgtctgcaagcagctcgtggccatgtacgggcag
ctcggccgcgagttccagaaggagctgacgctccggcagttcgccgaccagggcgagaac
gccggcgtcgggggcggcgccgccgggggcgtgggcggtggccagaacggcttctag

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