KEGG   Thermothielavioides terrestris: THITE_2108627
Entry
THITE_2108627     CDS       T02228                                 
Name
(RefSeq) hypothetical protein
  KO
K12831  splicing factor 3B subunit 4
Organism
ttt  Thermothielavioides terrestris
Pathway
ttt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ttt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    THITE_2108627
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ttt03041]
    THITE_2108627
Spliceosome [BR:ttt03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    THITE_2108627
 Complex B
    THITE_2108627
 Complex C
   U2 SnRNP specific factors
    THITE_2108627
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_7 PHM7_cyt RBD_DEAH11
Other DBs
NCBI-GeneID: 11517065
NCBI-ProteinID: XP_003649746
JGI: Thite2_2108627
UniProt: G2QS20
LinkDB
Position
1:complement(join(4833630..4834815,4834894..4834907))
AA seq 399 aa
MSRHWEQNKDATVYVGNIDERFTQELLSELMTQVGPVRQVHMPQDRVSQTHQGYGFVEFD
TPASAEYAAKVLNGIRIWGKPIRVNKASADKQKAVDIGAELFINNLDPQVDEKILYDTFS
QFGQILRQPNIVRDENHISKGYGFVSFDSFEASDAALSTMNGQYLLSKAITVEYAYKKDG
KGERHGDEAERKLAAEGKKHNILPEQQPLPPAFHMTAPISAAAPPVGAPTRPGAAVPSTV
NGPAAVAPPVSATVPPPGGYGSMPPTGPSGMGRAAPPPPSFGGRPMGTGAGGLPPPPSGL
PARPPPSHGGFGGSAGAFHHPPPPAGFPAGPPGAPVPGPVPGPGQPPAYPGMPPPPPGGF
AGGPPPPGAPVPPPGFMPLPAGVPQGFGAPPPPPGFARR
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgtcgagacattgggagcagaacaaagatgcgaccgtctacgtcggcaatatcgacgag
cgcttcacgcaggagctgctctcggagctcatgacgcaggtcggcccagtgcgccaagtc
cacatgccgcaggaccgcgtatcgcagacacaccagggctacggcttcgtcgagtttgac
acgcccgcttcggcagagtacgccgccaaggtgctcaacggcatccgcatctggggcaag
ccgatccgcgtcaacaaggccagcgccgacaagcagaaggccgtcgacattggcgccgag
ctgttcatcaacaacctcgacccccaggtcgacgagaagatcctctacgacaccttcagc
cagttcggccagatcctgcgccagccgaacatcgtgcgcgacgagaaccacatctccaag
ggctatggcttcgtcagcttcgactcgttcgaggccagcgatgccgccctgtccaccatg
aacggccagtacctgctcagcaaggccatcaccgtcgagtatgcctacaagaaggacggc
aagggcgagcgccacggcgacgaggccgagcgcaagctggccgccgagggcaagaagcac
aacatcctccccgagcaacaacccctcccgcccgccttccacatgaccgccccgatatca
gcagccgcgccgccagtgggagcccccacccgcccaggcgccgccgtgccctctaccgtc
aacggcccagcagccgtcgctccgcctgtcagcgccaccgtgccacccccgggcggctac
ggcagcatgcctcccacagggccgagcggaatgggccgcgcggcgccgccgcctccgtcc
ttcggcggccggcccatgggtaccggcgccggcggtcttccgccgcctccgtccggcctc
cccgcgcgccctcccccaagccacggcggcttcggcggctccgccggcgccttccaccac
ccgccgccccccgccggcttccccgccgggcccccgggcgcccctgtcccaggcccagtc
ccaggcccggggcagccgcccgcatatcccggcatgccgccgcctccgcccggcgggttc
gccggtgggccgccccctcctggtgcgccggtcccgccgccggggttcatgccgcttccg
gctggggtgccgcaggggtttggcgcgccgccgccgccgcctgggttcgcccggcgttag

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