Thermothielavioides terrestris: THITE_2110170
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Entry
THITE_2110170 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THITE_2110170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2110170
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
THITE_2110170
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
11523375
NCBI-ProteinID:
XP_003650571
JGI:
Thite2_2110170
UniProt:
G2QRU1
LinkDB
All DBs
Position
1:complement(join(7880981..7881161,7881236..7881611,7881680..7881835,7881920..7882274))
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AA seq
355 aa
AA seq
DB search
MMPNPHVYGHHQYPQAESAWMHQQPSHQHHAQAAAAAATVAQQQHYNRLATAHNTVGALG
QAHAPDNVLEGSVSEDNRRTLQYIADLLNENTREAALLELSKKREQVPELALILWHSFGV
MTSLLQEIISVYSLLSPSQLTAAASNRVCNALALLQCVASHNETRTLFLNAHIPLYLYPF
LNTTSKSRPFEYLRLTSLGVIGALVKNDSSEVINFLLTTEIIPLCLRIMETGSELSKTVA
IFIVQKILLDDNGLNYICATYERFYAVGTVLSNMVAQLVEQQTARLLKHVVRCFLRLSDN
ARAREALRQCLPEPLRDHTFSAVLRDDAATKRCLTQLLINLSENTMEPTAGQLTL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaaatccgcacgtctacggccaccaccagtatccccaggccgagtcggcctgg
atgcaccagcagccgtcgcaccaacaccacgcccaggccgctgccgctgccgccactgtc
gcccagcagcagcactacaaccggttagccaccgcccacaacaccgtcggcgccctcggc
caggcccatgccccagacaatgtgctcgaggggtccgtgtctgaggacaaccggcggacc
ttgcagtacatcgcagacctgctgaacgagaacacccgtgaggccgcgctgttggagctc
agcaaaaagcgcgagcaggttccggagctggccttgattctgtggcactcatttggtgtc
atgacgtcgctgctgcaagagatcatcagcgtctacagtctcctgagcccgtcgcagctt
actgccgctgcgtcgaaccgagtctgcaatgcgctggccctcctccagtgcgtcgcgtcg
cacaacgagacgcgcacacttttcctgaatgcgcacatcccgctctatctctatcccttc
ctcaacacgacgtccaagtcgcgacctttcgagtacctgcgactgacatcccttggggtg
atcggcgctctggtcaagaacgactcctcggaggtcatcaatttccttctcaccaccgag
atcatcccgctgtgcctgcgcatcatggagacgggttccgaactcagcaaaaccgtggcc
atcttcattgtgcagaagatcctgctcgacgacaacggcctgaactatatctgcgccacc
tacgagcgattctatgcggtgggtacggtcctcagcaacatggtcgcccaactggtggag
cagcagaccgccaggctgctgaagcacgttgtccgatgcttcttacggctcagtgataac
gcccgtgcacgcgaagcgctgaggcaatgcctccccgagccgctccgcgaccacacgttc
tcggccgttctccgcgacgacgcagcgacaaagcgctgcctcactcagctgctcatcaac
ctgtcagagaacacgatggagcctaccgccggccagcttacgctctag
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