Thermothielavioides terrestris: THITE_2110364
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Entry
THITE_2110364 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K13126
polyadenylate-binding protein
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03015
mRNA surveillance pathway
ttt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
THITE_2110364
09123 Folding, sorting and degradation
03018 RNA degradation
THITE_2110364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2110364
03041 Spliceosome [BR:
ttt03041
]
THITE_2110364
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
THITE_2110364
mRNA cycle factors
Stress granule specific factors
THITE_2110364
Spliceosome [BR:
ttt03041
]
Complex C
Other components
Complex C specific factors
THITE_2110364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_occluded
RRM_10
RBD_DEAH11
RRM_Nup35
RRM_RdRP1_2
YflT
PABC_AtC3H46
Motif
Other DBs
NCBI-GeneID:
11515311
NCBI-ProteinID:
XP_003650660
JGI:
Thite2_2110364
UniProt:
G2QSP1
LinkDB
All DBs
Position
1:complement(join(8192012..8192174,8192232..8194402))
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AA seq
777 aa
AA seq
DB search
MAAPVAPGAVDRLAADLGNTSLNGGDNRTPAINTNVAPGEYQTAETDTAGPTPSSTAPHP
QSSASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSTQDGEK
ALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS
CKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKDRQSKFEEM
KANFTNVYVKNINHEVTEEEFRELFAKYGEVTSSSLARDNEGKSRGFGFVNFTTHASAAK
AVEELNGKEFRGQELYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLADDVD
DDKLRQMFSEFGPITSAKVMRDAPPEPPAGSEGDKEGKDKENKKESEKEGEGEAAEKKTE
KKVERKLGKSKGFGFVCFSNPDDATKAVAEMNQRMVDGKPLYVALAQRKDVRKSQLEASI
QARNQLRMQQAAAQAGLPQQYMQAPVYYAPGQQPGFLPPGGRGMPFPQGGIGMPAVQGGR
PGQFPPYAQQGGRGGMPQQLPIYPLGQFPPGTYPQPNNPQFLAAIQQVQQQAAALGTGRG
GPGGRGMQGMPIPQGMPGGPGLAGYPPNGRPQNGNMAGRGGPNRGGSFAAGRGGVPPAGP
VGATGELSATALLQSQLAATTNIHAQKQILGENLFPKIQAIQPELAGKITGMLLEMDNNE
LVHLLEDEAALLAKVNEAMAVYDEYVKSQQGAGAAPGAGPAGAEADKSKEEKAEEKA
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcccgttgcccccggcgctgtcgaccggcttgccgctgatctcggcaacacc
agcctcaatggcggcgacaatcgcaccccggccatcaataccaatgtggctcctggcgag
taccagacggcagagaccgacacggccggcccgaccccgagctcgactgctcctcacccg
cagtcttcggcctccctctacgtcggcgagctggacccgtctgtgaccgaggccatgctc
ttcgagctgttctcccagatcggctctgtcgcctcgatccgcgtctgccgtgatgccgtc
acccgccgctcgcttggctacgcctatgtcaactacaactcgacccaggatggcgagaag
gcgcttgaggagctcaactacacgctcatcaagggccgcccgtgccgcatcatgtggtcc
cagcgtgaccctgctctgcgcaagaccggccagggcaacgtgttcatcaagaacctcgat
gtcgccatcgacaacaaggccctccacgacacctttgctgctttcggcaacatcctgagc
tgcaaggttgcccaggacgagaacggcaactccaaggggtacggtttcgtgcactacgag
accgacgaggctgctgcccaggccatcaagcacgtcaacggcatgctcctgaacgagaag
aaggtctatgtcggctaccacatccccaagaaggatcgtcagagcaagttcgaggagatg
aaggccaattttacgaacgtgtacgtcaagaacatcaatcacgaggtcaccgaagaggag
ttccgcgagctgttcgccaagtacggcgaggtcacctcgtcgtcccttgcccgcgacaac
gaggggaagagccgcggtttcggcttcgtcaacttcactacccacgccagtgctgccaag
gccgtcgaggagctcaatggcaaggagttccgcggccaggaactctacgtcggccgtgct
cagaagaaacacgaacgcgaggaggagctccggaagtcctacgaggctgctcgcctcgag
aaagctaacaaatatcaaggcgtcaacctgtacatcaagaacttggccgacgatgtcgat
gacgacaagctgcgccagatgttctccgagttcggccccatcacctccgccaaggtgatg
cgcgatgctccccccgagccccctgctggctccgagggcgataaggagggcaaggataaa
gagaacaagaaggagagcgagaaggagggcgagggcgaggctgccgagaagaagaccgag
aagaaggtcgagcgcaaactgggcaagagcaagggctttggctttgtgtgcttcagcaat
ccggatgacgccacgaaggccgtcgccgaaatgaaccagcgcatggtcgatggcaagccg
ctctacgtcgctcttgctcagcgcaaggacgtgcgcaagagccaacttgaggccagcatt
caggctcgcaaccagctccgcatgcagcaggccgctgcccaggccggcctgccccagcaa
tacatgcaggcgcccgtctactacgctcctggccagcagcccggtttcctgcctcctgga
ggccgcggcatgccgttcccgcagggcggtatcggtatgcctgctgtgcagggcggccgc
cccggacagttccctccctatgcccagcagggcggtcgtggcggcatgcctcagcagctc
cccatttatcctctcggccagttcccccccggcacctatcctcagccgaacaacccgcaa
ttccttgcggccattcagcaggtccagcagcaagccgccgcccttggcaccggacgtggc
ggtcctggcggtcgtggtatgcagggtatgcccattccgcagggcatgcctggcggtcct
ggccttgccggctaccccccgaatggtaggccccagaacggcaacatggctggtcgtggc
ggtcctaaccgcggcggcagcttcgctgctggccgtggcggtgtcccccctgccggccct
gttggcgcgaccggcgagctcagcgccaccgccctcctgcagtcgcagctcgcagccacc
acgaacattcacgcgcagaagcagattctcggtgagaatctcttccccaagatccaggcc
atccagccggagctggccggcaagatcaccggcatgctgttggagatggacaacaacgag
cttgtacacctgcttgaggacgaggctgcgctgctcgccaaggtcaacgaagccatggct
gtctacgacgaatacgtcaagtcgcagcagggtgcgggtgctgcccccggcgcagggccg
gccggggctgaggccgacaagtccaaggaggagaaggccgaggaaaaggcctaa
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integrated database retrieval system
