Thermothielavioides terrestris: THITE_2111680
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Entry
THITE_2111680 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
ttt
Thermothielavioides terrestris
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttt03021
]
THITE_2111680
Enzymes [BR:
ttt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
THITE_2111680
5.6.2.5 RNA 5'-3' helicase
THITE_2111680
Transcription machinery [BR:
ttt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
THITE_2111680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEN1_N
AAA_11
AAA_12
SEN1_barrel
AAA_30
AAA_19
UvrD-helicase
Viral_helicase1
DEAD
AAA_22
CHD5
Motif
Other DBs
NCBI-GeneID:
11520855
NCBI-ProteinID:
XP_003651416
JGI:
Thite2_2111680
UniProt:
G2R374
LinkDB
All DBs
Position
2:join(1009043..1009398,1009482..1015029,1015101..1015283,1015348..1015416)
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AA seq
2051 aa
AA seq
DB search
MDIDALFQAAITWHRAFEDRPPDAHLCCPKVDDEDPANYDEPDVPDEGGVSVDGKKRRIK
EYEDRFHNVYNLSILMGLGREVAGEWLDNWVQAVEFCLTRCDSCVRNWHRNREPYLNGLR
LGPEHIDYMRKRLDEFDKQRIDAGLQRARRILEEHGPMSTAKLVEHDMSAVLALFEALCS
VQYLTSPDDRQDFDYVFGQTQRKRPLRLQGGLLPAMTLFLFDESSFPERRIFAENAWEKR
PAESLTDQEWDWAVSPLLTAAILRVSLSRGMPSPDKICRFWRGFSFILRSLSEKQIINSL
RAMEVSPSVYFLALEHFATDSGEALAMVLRGLRALMEKSSSAFWSAFDQVTPSQLVEEIF
KSPAFRRFLNKSLESDMMVTDGGTQVPALAAWMRALIRSLPAIQRSDVCESSLRHLFDTF
RQDPTVDRAAQATCTLAGLVTLSESLDGFLHQEVSFDTGTALIMVNQLLNRVVQYSDVIS
TAAGLKPGDTFNVGISQTAMDIIHSALALDARATEIEWKALIDGVPVQDAVNRDSGALWE
SFLEMLWYGQLGHLELAKAMLMATLRLRHIEQFLPKRKEQLKQEHQKFNQRYQQQTAAIG
KMLGRLSDFKQEDLNKFCSDRQSPTIHPILSTLIHGEDAIREAGFELLKAITGESLPSDA
VTKMLEDHFIAFLDACSEAVGKVTARVHPSSPWSHMLPILKCSEFVLNGLCDPSVGQLRR
KSLTAEEHAAVKRWWQTTWQVVGHSFRMMRSWHERVDKKIMEDFCRDVMELSNKLLAQDG
LMASALSQHCSDDAARTEGDATTRAMKIVLEPPRRQSQSIADMLQLKDKYLIMGIIEVIK
KLLARLQQNAMDLPQSALAHLHNMLKRRKLPDGRLDYAQKTNMTDEQRIELLKALGEDAV
IEEQFIGTKPGQKERSMRQSKLDFSKGSLNLVEAMKDHVAEITPNFEKHKSALRESWKDD
IPKIKAPPKLDQKAILANQASIKEARAREKAEKAKRDAEAIAKARALRAPPKTVAGEGSG
LQGIAGVRGKDHAPVIKDEIMVGSSSSEEDDSEDERIALKAKASNKNLNEAERRHLLLLA
EKRGPVKKVKLQRSAKDMRARLIPPMDVLHQAILEWDIFHEGNDPPNGYRCEGVSDTYTD
PHSYKQTFFPLLINEAWRSFVTAKDEATSKPFGIKVLNRTAVDKFVEIVASVPAQVSKDR
GLSEGDIVIFSKGEDPLNQPTELHCLSRIWKTTYKKDTVEVLYRLNARGNQILPVLLPGS
EFHVVKITNMTTIEREYAALESLQYYDLMDEVLKAQPSPMLTFGEEAVRGVMQNYQLNPG
QARAILNAKENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKSSNGGVALARPGGAAPAG
SAPSKKLLVCAPSNAAVDELVLRLKAGVKTMNGTTHKIEVLRLGRSDAINAAVKDVTLDE
LVRIRMEAEINNGGPSDREKLHQEAGELKEKVAELKPQLEAARASDNRALAMKLQREFDE
LKRRQAHIGAKIDAQKSDGNTFAREVEIKRRQIQQDILDKAQVLCATLSGSGHEMFKNLN
VEFETVIIDEAAQCVELSALIPLKYGCSKCILVGDPKQLPPTVLSQSAARYGYDQSLFVR
MQKNHAKDVHLLDMQYRMHPEISRFPSKVFYEGLLQDGADMGKLRLQPWHQSVLLGPYRF
FDVKGSQERGPKNQSLVNEEELKVALQLYRRFRTDYSNVDLKGKIGIITPYKAQLFRLRQ
RFTEKYGEGITEEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRAK
SSLWILGDSRALVQGEFWAKLIEDAKQRDRYTNGNIMALLSQPGPKVPLASLAAPSPRPT
EAQGLAWEENDVMMTDAPVNHKQESPTSMSSTPAQQGWGTPRPYQDEETTAPPPLPYRGT
GIGGLNEKGEVTAIMPRGAGPPMIQSTTGSAGKKRQRDNDDGHASTKKTQHNSDRAPVKP
PTGPNAAQPPKTPGDPSGMEVLGMTPPTRPPPPQPRPPPIRPPGPNAPKGQVVMPKRPNA
DPFIRRKPGKR
NT seq
6156 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgacgcactcttccaagcagccatcacctggcaccgggcctttgaagatcgc
ccgcccgacgcccatctctgctgtcccaaggtcgacgacgaagaccctgccaactacgat
gagccggatgttcccgacgaaggcggagtatctgtcgacggcaagaagcgccggatcaag
gagtacgaggacagattccacaacgtatataacctcagcatcttgatggggcttgggagg
gaagtcgcgggggaatggctggacaattgggtgcaggccgtcgagttctgcctgacgaga
tgcgattcgtgcgtgcgcaattggcaccggaatcgtgagccttacttgaacgggctgcgt
ctcggccccgagcacattgattacatgcggaagcggctcgacgaattcgacaagcaacga
atagatgccggcctgcagagggccagaagaatactcgaggagcatggaccaatgtcaaca
gcgaagttggttgagcatgacatgtcggcggttttggccctcttcgaggctctctgcagc
gttcagtatctcaccagccccgacgaccgacaagacttcgactatgtcttcgggcaaacg
caacggaaacggcccctgagattgcagggtggtctcctacctgcaatgaccttgttcctt
ttcgacgaatcctcatttccggaaaggcgaatatttgccgagaacgcctgggagaaacgg
ccagctgagtccctgacggaccaggagtgggactgggccgtttctccccttttgaccgcg
gccattctgagggtgtcgctctcgagaggaatgccctcaccggacaagatatgcagattc
tggcgcggtttttccttcatcctccgctctttaagcgaaaagcaaatcatcaactcgctc
cgggcgatggaggtgtccccgagcgtctacttccttgcccttgagcacttcgctaccgat
tccggggaggccctcgccatggtcttgaggggccttcgagcgcttatggaaaaatcgtcg
agcgctttttggtctgcgtttgatcaagtcacgccgagccagctcgtcgaggagatcttc
aaaagcccggccttccgccgctttttgaacaagtccttggagtcggatatgatggttacc
gacggaggcacccaggtccctgctttggctgcttggatgagggcattgattcgctctttg
cctgctatccaacgatcagatgtctgcgaatcatcgctgaggcatctcttcgacaccttc
cggcaagatccgacggtcgatagagctgcccaagcgacctgcactctggcgggcctggtc
accctcagcgagtcgttggatggttttcttcatcaagaggtctcattcgacaccggaact
gcattgatcatggtcaatcagcttctcaatcgtgtcgtccagtacagcgacgtaatcagc
accgcggccggtctcaaacctggagacacgttcaatgtcggcatctcccaaaccgccatg
gacatcatccactccgcactcgcgctggatgccagagccacggagattgagtggaaagcc
ttgatcgacggcgttccggtacaagatgcggtgaaccgagattctggggcgctttgggaa
tccttcctcgagatgctctggtacggccagctcgggcatcttgagctcgccaaagctatg
ctgatggctacattgcggctcagacatatcgagcagttcctccccaagcgtaaagagcaa
ctcaagcaagagcatcaaaagttcaaccagaggtatcaacagcagacggcggcgattggg
aagatgctcggtcggctgtccgatttcaagcaggaggaccttaacaagttctgctcggat
cgccagagcccaaccattcatcccatcttgtcgaccctgatccacggcgaggacgccatt
cgcgaagctggcttcgaactgctcaaggctatcacaggtgagagcttgccgtctgacgca
gtgaccaagatgctagaggatcacttcatcgcgttcctggacgcgtgttccgaagcagtg
ggcaaagtcactgctagagtgcatcccagcagtccctggagccacatgctcccaatcttg
aagtgtagcgagttcgttctgaacggcctttgcgatccgtccgtaggtcagctccggcgc
aagtctctcactgccgaggagcacgccgcggtcaagcgctggtggcagactacgtggcag
gtcgtcggccactcattccggatgatgagatcatggcatgaaagagttgacaaaaagatc
atggaggacttctgtcgagacgtcatggaattaagcaacaaattgcttgcccaagacggc
ctcatggcttccgcgctcagtcagcattgcagtgacgatgctgcgcggaccgaaggggac
gctacgacgagggccatgaagatcgtcttagagccgcccagaagacagtcacagtctatc
gcggacatgctgcaactcaaggacaagtacctgatcatgggcatcatcgaggtgatcaag
aagctcctcgcacggttacagcagaacgccatggatctgcctcagtcggctcttgcgcat
cttcacaacatgctcaagcggaggaagctccccgatggaaggctggactacgcccagaag
accaatatgacggacgagcagcggatcgagctactcaaggctctcggggaggatgccgtg
attgaggagcagttcataggcaccaaacccggccagaaggagcggtccatgaggcagagc
aagcttgatttctctaagggaagtctgaatcttgtggaggccatgaaggaccatgtcgcc
gagatcacccctaatttcgagaagcacaagtctgctctacgggagtcttggaaagacgac
atcccgaagatcaaagcgccgcccaagcttgaccagaaggcaatcctcgcaaaccaggca
tcgatcaaagaggctcgagccagagagaaggcagagaaggccaagagagacgccgaggcc
attgctaaagcgagagccctgcgcgccccgcccaagaccgtggcaggagagggctcgggg
ctacagggcatcgctggtgtgcgaggcaaggaccatgctccggtcatcaaggacgagatc
atggttggatcatcctcttccgaagaagatgattccgaggacgagcgaatagcgctgaag
gcgaaggctagcaacaaaaatctcaacgaagccgaacgccgtcatctgctcttgttggcc
gaaaagcgcgggcctgtgaagaaggtcaagctgcagagatcagcgaaggacatgcgagcg
cgactgatcccgccgatggatgtgctgcaccaagccatcctagagtgggatatctttcac
gaaggcaacgatcctccaaatggctaccgctgcgagggcgtctctgatacgtacactgat
ccccacagctacaagcagaccttcttccctctcctcatcaacgaggcctggcgctccttt
gtcacggcgaaggacgaggcgacgtccaagccctttggcatcaaggtgctcaaccgcacg
gcggtggacaagtttgtggaaattgttgcttcggtgcccgcgcaggtcagcaaggatcgt
ggcctctcggagggtgacatcgtcatcttttcaaaaggggaggatccgctcaaccaaccg
acggagctgcactgcctctcgcggatatggaagacgacgtacaagaaggacaccgtcgag
gttctctaccgcctcaacgccaggggaaaccagatcctgccggtccttcttccaggttcc
gagttccatgtcgtcaaaatcaccaacatgacgacgatcgagcgcgagtatgctgcgctg
gagagcttgcagtactacgatctcatggacgaagtcctgaaggcgcagccgtcaccgatg
ctgacgtttggtgaggaggcggtgagaggggtcatgcagaactaccagctcaacccgggt
caggctcgcgccatcctcaacgcgaaagaaaacgacggcttcaccctgattcaaggtccg
ccaggtactggcaagaccaagacgatcgtcgccatggttggctgtcttcttaccggggtg
ctcaagtcatcaaatggcggcgtggcgcttgctagacccggcggtgctgcacctgctgga
tcggcaccgtcgaagaagctgcttgtctgcgcgcccagcaatgccgccgtggacgagctg
gtgctgcggttgaaggctggcgtcaaaacgatgaatgggacgacgcataagatcgaagtg
ctgcgtttaggccgcagcgatgcgatcaacgctgccgtcaaagatgtcacgcttgacgag
ctggtcaggattcggatggaagccgaaatcaacaacggcggccctagcgatcgagagaag
ctgcaccaggaagccggcgagctcaaggagaaggtcgcggaactgaaaccgcaactcgag
gcagctcgggcgagcgataaccgcgctcttgccatgaagctgcagcgcgagttcgatgag
ctgaagcgtcgccaggctcacatcggcgccaagatcgacgcccaaaagagcgacgggaac
accttcgcccgcgaggttgagatcaagcgccggcagatccagcaggatatcctcgataag
gctcaggtcttgtgcgccacgctgagcggcagcggccacgagatgttcaagaacctcaac
gtcgagtttgagacggtcatcatcgacgaggcagctcagtgcgtcgagttgagcgccctc
atcccgcttaagtatggctgctcaaagtgcatcctcgtcggtgatcctaagcagctgccg
ccgactgtgctctcgcaatctgccgcacggtacggctacgaccagagcttgtttgtccgg
atgcagaagaatcacgctaaggacgtccacctgcttgacatgcaatatcgcatgcacccc
gagattagccggtttcccagcaaggtattttacgagggcctgttacaggatggcgccgac
atgggaaagctgcgcctgcagccgtggcaccaaagcgtcctcctcggaccttaccgcttc
ttcgatgtcaagggctcgcaggagcgtgggccaaaaaaccagtcgttagtcaacgaggaa
gagctgaaggtggcgctgcagctgtaccgccgcttccgcacggactacagcaatgtcgat
ctgaagggcaagattggcattatcacgccttataaggcgcagttgttccggctccggcag
cggttcacggaaaagtacggtgaagggattaccgaggaaatcgagttcaacacgacggac
gcgttccagggccgcgagtgtgagattatcatcttctcctgcgttcgagccagcccgact
ggcggtatcggtttcatgacggacatccgccgtatgaacgtcggtctgacccgtgccaag
tcgtcactgtggatcctgggtgattctcgcgcactggttcagggtgaattctgggccaag
ctcattgaggatgcaaagcaacgcgatcgctacacgaacggaaacatcatggcactgctc
agccaaccgggtccgaaggtgccgctcgcatcgcttgctgcaccatcccctcgcccgacc
gaggcccaggggttggcatgggaggaaaatgatgtgatgatgactgatgcgccggtcaat
cacaaacaggaatcccctacaagcatgtctagcacgccagcacagcagggatggggcacg
ccaaggccgtaccaggatgaagagacgacggcgccgccaccgcttccttaccgcggcacg
ggcatcggtggcctcaacgagaaaggagaggttacggccataatgccgaggggcgcggga
ccgcccatgatccaatctacgaccgggtccgcgggcaagaagaggcagcgcgataacgat
gacggccacgccagcactaagaagacgcaacacaactctgaccgagcccccgttaaaccc
ccgacaggtcccaacgcggctcaaccgcccaaaacaccgggcgatccttcaggaatggaa
gtgctaggcatgacgccccctacgcgaccacctcccccacaacctcggccccctccaatc
cgtccgcctggacccaatgcgcccaaggggcaagtggtgatgcccaaacggcccaacgcg
gatcctttcattaggaggaagcctggcaaacgttga
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integrated database retrieval system
