Thermothielavioides terrestris: THITE_2112144
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Entry
THITE_2112144 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THITE_2112144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2112144
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
THITE_2112144
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
11517750
NCBI-ProteinID:
XP_003651630
JGI:
Thite2_2112144
UniProt:
G2R517
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All DBs
Position
2:complement(1768939..1770075)
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AA seq
378 aa
AA seq
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MTTPTSTSTPTPAPTLSFPRPVFAKLSPHPYLLRSLAPSSPDRPPVRTNGRAPHEARAVH
VNASSLSHAHGSALVRAGDSTVICGVRGELLPVERIPLFRPRNRKTLHGDDEDDAAQQEG
GRGITGSGTGTGRGELRDYDLLVPNVELATGSAPQFLPGVPPTALAQTLASRVYSLLHAT
GLVRAEDLRVWYRPGEKGGRRAGEDVEMGEAEEEDKEKEEERVVAYWVLYIDLLFVSFDG
NPFDVAWAAVVAALRDTRLPVARWDPDREMVVCSRTERRKLDVRGLPVACSAAVFMEKEH
REAAAGAGEGRHWILLDPDRLEESLCQEVITMVVDCSDGETRIKSIEKLGGTVLGRELIR
GFAGVAERRWKTVRDAMP
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaccaacatcaacatcaacaccaacccccgcacccaccctctccttcccccgc
cccgtcttcgccaagctctcgccgcacccctacctcctgcgcagcctcgcgccttcctcg
cccgaccgcccgccagtccgcaccaacggccgcgcgccgcacgaggcccgcgccgtgcac
gtcaacgcctcctcgctctcccacgcccacggcagcgcgctcgtgcgcgccggcgactcg
accgtcatctgcggcgtgcgcggcgagctgctgccggtcgagcgcatcccgctgttccgg
ccccgcaacagaaaaaccctgcatggggatgatgaagatgatgctgcccagcaagagggt
ggtagagggatcacgggttcgggcacgggcaccggccggggcgagctgcgcgactacgac
ctgctcgtgcccaacgtcgagctcgcgaccgggtcggcgccccagttcctgccgggcgtg
ccgccgaccgcgctggcgcagacgctcgcctcgcgcgtgtactcgctgctgcatgccacg
gggctggtgcgggcggaggacttgagggtgtggtaccggcctggggagaagggagggcgg
cgggcaggggaggatgttgagatgggcgaggcagaggaggaggacaaagaaaaagaggag
gagagggtggttgcctactgggtgctgtatatcgacttgctgtttgtgtcgttcgacggg
aacccgttcgatgtggcgtgggcggcggtcgtggcggcgctgagggatacgcggttgccc
gtggcgaggtgggaccccgatcgggagatggtcgtgtgctcgcggacggagaggaggaag
ctcgacgtgaggggtttgcccgtggcctgtagtgctgcggtgttcatggagaaggagcat
cgcgaggctgctgcgggggccggagagggcaggcattggattctgctggatccggaccgg
ctggaggagagtctctgccaggaggtcatcacgatggtggtggactgcagcgacggggaa
acgaggataaagagcatcgagaagctgggcggcactgtgcttgggagggagttgattcgt
ggctttgcgggcgttgccgagcggcgatggaagacggtcagggatgccatgccctga
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