Thermothielavioides terrestris: THITE_2112188
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Entry
THITE_2112188 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
THITE_2112188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ttt03041
]
THITE_2112188
Enzymes [BR:
ttt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
THITE_2112188
Spliceosome [BR:
ttt03041
]
Complex A
U2 snRNP components
U2 related factors
THITE_2112188
Complex B
THITE_2112188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
Motif
Other DBs
NCBI-GeneID:
11518895
NCBI-ProteinID:
XP_003651657
JGI:
Thite2_2112188
UniProt:
G2QY27
LinkDB
All DBs
Position
2:complement(join(1861497..1864574,1864629..1864997,1865061..1865195))
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AA seq
1193 aa
AA seq
DB search
MARPRDSRSPSPAGSHAARRRKDDERRDRDRDRDRDYRRRSRSPDRRYRDRERDYGRERD
RDRDRDSYRWRDRSLDRRDDDYYRGSRRDGGTARDRRRSRDRGPDRPRSPDRRGPRGGDA
SRDYRDKRDDSRDRRSRRDGSHDSASQHGDGGRSRAHKADGVAGRDSEDSQSVKSTQTQA
QTEAEKKAERLRKLQAMKEKHALKEAREADVTAGSTRQLLAEMDQKASGAADLRSPLPTQ
ASPAPASPAAAAPAPYAGKFDPKAIAKNSKAARSQSPAKLGDAQLGASGGRTSDVRTEAS
SKGAGLLPANRAVSAFGFQKNADAQKSASKRKLDMDDEEIIKRKLVKLPDFVPENADSTS
PAEGDAEEDGEEDLDLRMARNEEDMAEAHRILQERRDERIQKEGMAMDVDTETPNGEIKD
EPMPPVPPTADIEEEDVDPLDAFMADLEHTGTAGGVGSKPPKPSQNAKKGFEPEAYFSED
DYGFEADNADPASILAMAAKKKKKDIPTVDYSKIELNPIRKNFWVEPQELSQMTEEEAAD
LRLELDGIKVSGKNVPRPVQKWSQCGLTRPILDTIEGLGYEKPTPIQMQALPVIMSGRDV
IGVAKTGSGKTMAFVLPMLRHIKDQDPVSGDDGPIGLIMTPTRELCTQIYSDLLPFTKAL
KLRAVAAYGGNAIKDQIAELKRGAEIIVATPGRMIDLLAANSGRVTNLKRATYIVLDEAD
RMFDMGFEPQVMKIFNNVRPDRQTILFSATMPRIIDALTKKVLREPVEITVGGRSVVAPE
ITQVVEIIEESKKFVRLLELLGELYADDDDVRALIFVERQEKADDLLRELLRRGYGCMSI
HGGKDQEDRNSTISDFKKGVCPILIATSVAARGLDVKQLTLVVNYDAPNHLEDYVHRAGR
TGRAGNTGTAVTFITEEQENCAVGIAKALEQSGQPVPERLNEMRKAWREKVKAGKAKDAS
GFGGKGLEKLDKDREAARMRERKTHKAEGEEDDFKEEETAEDGKKDKATLAIEAAASAIV
SRDAAKAEAEARAAAADGAAKTGAATSTGKGGGGALDKAASAISEINARLARAGQLRAGQ
PIDNKGPDAGAFHATLEINDFPQKARWAVTNRTNVAKILEATGTSITTKGNYYPPGKEPA
PGGEPKLYILIEGDTELVVSRALAELTRLLREGTLAAADAESRAPVSGRYTIT
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggctcggcccagagactcgcgctcaccatctcctgcaggaagtcatgctgcgcgaaga
cggaaagatgatgagcggcgcgaccgcgaccgcgaccgcgaccgcgactaccgccggcgc
tctcgcagccctgatcgccggtaccgcgatcgcgaacgtgattatggccgggagcgggat
cgggaccgggaccgcgactcataccgctggagggaccgttccctagatcgccgagatgat
gactactatcgaggctcacgacgcgatggagggaccgctcgtgaccgtcgtcggtcacgc
gaccgtggcccggacaggccgcgatcgccggatcgccggggtccacggggtggcgatgcc
agccgagactaccgcgataagcgggacgactctcgcgaccgaaggagccgtcgtgacggc
tcacacgattccgcttcccagcatggcgatggcggtcgctctcgggctcacaaggcggac
ggcgtagcgggcagagacagcgaggactcgcaatcagttaagtccacacagacccaggcg
cagaccgaggcggagaagaaggctgagcgactacgcaaactccaagctatgaaggaaaag
cacgccttgaaggaagccagggaagccgacgttactgccggaagcactcgtcagctcctg
gccgagatggatcagaaggccagcggcgcagcggatttaaggagccctctgcctacccag
gcgagtcctgccccggcgtcacctgcggctgctgcccccgctccgtacgccggcaagttc
gatccaaaagccatcgcgaagaactccaaagctgcacgatctcagtcccccgctaagctg
ggtgatgcccagctgggcgcctctggaggcaggacgtcagatgtcaggaccgaggccagt
tccaagggtgccggcctgctgccggccaacagggctgtcagtgcattcgggttccagaaa
aacgctgacgcccagaaatcggcctctaagcgcaaactggacatggacgatgaggagatt
atcaaacgcaagctcgtcaagctccccgacttcgttccggagaatgcggacagcacgtcg
cctgcggagggcgacgcggaagaggatggagaggaagacctcgatcttcgaatggctcgg
aatgaggaggatatggcagaggctcaccgaattctccaagagaggcgcgacgagcgcatt
caaaaggagggcatggcgatggacgtcgacacggagacgccgaacggggagatcaaggac
gagccaatgccgccagtgcctcccaccgcggacattgaagaagaagatgtggatcccttg
gatgcgttcatggctgaccttgaacacacgggcacggcaggtggcgtcggatcaaagcct
cccaagccgtcgcagaatgcgaaaaagggcttcgagccagaggcatacttcagcgaggat
gattacggtttcgaagcggacaacgccgacccggcttccattcttgccatggctgccaag
aagaagaagaaggacattccgactgtcgactacagcaaaatcgagctcaacccgatccga
aagaatttctgggtcgagccgcaggagctgagccagatgaccgaagaagaagcggccgat
ctgcggttggaattggacggcatcaaagtctcgggcaaaaacgtgcccagaccggtccaa
aagtggtcacaatgcggtctcacccggccgattttggataccatcgaaggactcggctac
gagaaaccgacgccgattcaaatgcaggcgctgcctgtcatcatgtcgggccgcgatgtc
atcggtgtcgcaaagacgggctctggcaagacgatggcctttgtccttcccatgctccgc
cacattaaggaccaagacccggtaagcggggatgacggccccattggcctgatcatgact
ccgaccagagaattgtgcacccaaatctactcggatttgctgccgttcaccaaggcgctg
aagcttcgcgcggtcgctgcctatggcgggaatgccatcaaagaccagatcgccgaactg
aaacgaggcgctgagatcatagtcgccacgccaggacggatgattgatctccttgcggcg
aactcgggccgggttaccaacctcaagcgtgccacgtacatcgttctcgacgaggcggat
cgcatgttcgacatgggcttcgagccgcaggtgatgaagatcttcaacaacgtccgacct
gatcggcagacgattctgttttctgccaccatgcccaggatcatcgacgcgctcaccaag
aaagtccttcgagagccggtcgagatcacggtgggcggccgcagcgttgtggcgccggag
atcacccaggttgttgagatcatcgaagagagcaagaagttcgtccgcctgctcgagctc
ctcggtgagctgtatgccgacgacgacgatgtccgcgccctgatatttgtggaaaggcaa
gagaaggcggacgatttgctgcgcgagctcctgcggcgcgggtacggctgcatgtcgatc
cacggtgggaaggaccaggaggatcggaactccaccatctcggacttcaagaagggcgtc
tgtcctatcctcatcgcgacctcggtggcggcgcgcggactggacgtcaagcagttaacc
ttggttgtcaactacgatgcgcctaaccatctcgaagactatgtccaccgcgccggccgg
actgggcgcgcgggcaataccggcactgccgtcaccttcatcacagaggagcaggagaat
tgtgcggtcggcatcgcaaaggctctcgaacagagcgggcagcccgtgcccgagcgtctc
aacgaaatgcgcaaggcgtggagagagaaggtcaaggctgggaaggcgaaagatgcgagc
gggtttggcggcaaggggctggagaagcttgacaaggatcgcgaggccgcgcgcatgcgt
gagcgcaagacgcacaaggccgagggcgaggaagatgacttcaaggaggaggagacggcg
gaagatggcaagaaggacaaggctacgttggccatcgaagccgccgcctcggccatcgtc
tcccgtgacgcggccaaggccgaggccgaggccagggccgccgctgccgacggcgcagcc
aagactggcgcggcgacgagcaccggcaagggcggcggcggcgcccttgacaaggcggcg
tccgccatcagcgagatcaacgcgcggctcgcgcgcgccggtcagctccgtgctggacag
ccgatcgacaacaagggccccgacgccggggcgttccacgcgacgctggagatcaacgac
ttcccccagaaggctcggtgggccgtcaccaaccgtaccaacgtggccaagatcctcgag
gccacgggcacgtcgatcacgaccaagggcaactactacccgcccggcaaggagcctgcg
ccgggcggcgagccgaagctgtacattctcatcgagggcgacacggaactggtggttagc
agggcgctagcggagctcacgcggctgcttagggagggcacgctggctgctgcggatgcc
gagagccgggcgccggtgagcggcaggtataccattacctga
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integrated database retrieval system
