Thermothielavioides terrestris: THITE_2112208
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Entry
THITE_2112208 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03030
DNA replication
ttt03410
Base excision repair
ttt03420
Nucleotide excision repair
ttt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THITE_2112208
03410 Base excision repair
THITE_2112208
03420 Nucleotide excision repair
THITE_2112208
03430 Mismatch repair
THITE_2112208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttt03032
]
THITE_2112208
03036 Chromosome and associated proteins [BR:
ttt03036
]
THITE_2112208
03400 DNA repair and recombination proteins [BR:
ttt03400
]
THITE_2112208
DNA replication proteins [BR:
ttt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
THITE_2112208
DNA Replication Termination Factors
ELG1-RFC complex
THITE_2112208
Chromosome and associated proteins [BR:
ttt03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
THITE_2112208
DNA repair and recombination proteins [BR:
ttt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
THITE_2112208
Check point factors
HRAD17(Rad24)-RFC complex
THITE_2112208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
Rad17
DNA_pol3_delta2
RCF1-5-like_lid
RuvB_N
AAA_22
AAA_11
AAA_16
Mg_chelatase
AAA_assoc_2
AAA_14
AAA_28
DUF815
AAA_19
AAA_7
AAA_5
SLFN-g3_helicase
AAA_30
AAA_24
bpMoxR
DNAX_ATPase_lid
ResIII
DUF4863
RNA_helicase
Cdc6-ORC-like_ATPase_lid
nSTAND3
Motif
Other DBs
NCBI-GeneID:
11518904
NCBI-ProteinID:
XP_003651666
JGI:
Thite2_2112208
UniProt:
G2QY36
LinkDB
All DBs
Position
2:join(1885650..1885768,1885826..1885904,1885980..1886933)
Genome browser
AA seq
383 aa
AA seq
DB search
MSNFFDLKARKAAAANGAASSSAEKQTNETARVQPWVEKYRPKTLSDVTAQDHTVSVLQR
TLQASNLPHMLFYGPPGTGKTSTILALAKELYGPELMKSRVLELNASDERGISIVREKVK
DFARTQLTNPPPGYKARYPCPPFKIIILDEADSMTQDAQSALRRTMETYSKITRFCLICN
YVTRIIDPLASRCSKFRFKSLDQGNARRRLEEIARLEGVGMEDGAVDALIKCSDGDLRKA
ITFLQSAARLVGASSAGSDGKDEDRMGVDKKLVTAKVVEDIAGVIPDDTIQKLVAAMRPR
AAGETYQAIAKVVEDLVADGWSAGQTMAQLHQAVVYDETIPDIQKNRIVMVFSEIDKRLV
DGADEHLSILDLALRISGILAGR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacttcttcgacctcaaagcccggaaggcggccgcggcaaatggggccgcatcg
agcagtgccgaaaagcagacaaacgagaccgccagagtgcagccctgggttgagaaatac
cggcccaaaacgctcagcgatgtgacagcgcaagaccatacggtttccgtgctgcagcgg
acattgcaagcttccaaccttccacacatgctcttctacggccctcctggcaccggcaag
acgtccacgatcctcgcgctcgccaaagagctgtacgggcccgaactcatgaagtcgcgc
gtgctggaacttaacgcctcggacgagcgcggcatctcgatcgtgcgcgagaaggtcaag
gacttcgcccggacacagctgacgaacccaccgcctggctacaaggcgcgatacccgtgc
ccgccgttcaagatcatcatcctcgacgaggcggacagcatgacgcaggatgcgcagagc
gccctgcgccggaccatggagacgtacagcaagatcacgcgcttctgcctcatctgcaac
tacgtcacgcgcatcatcgatcccctggccagccgctgcagcaaattccgcttcaagagc
ctcgaccaggggaacgcgcggcggagattggaggagattgcgaggctcgagggcgtgggg
atggaggacggcgctgtggatgccttgatcaagtgcagcgacggcgatctgagaaaagcg
attactttcttgcaaagcgctgcgagactggtgggcgccagcagcgcggggagtgatggc
aaggatgaggaccggatgggtgtggataagaagctggtcacggccaaggtggttgaggat
attgccggcgtcattccagatgatacgatccagaagctggtggcagccatgaggccgcgg
gctgctggtgagacgtaccaggccatcgcgaaggtggtggaggacctggtggccgatggt
tggagcgcagggcagaccatggcacagctccatcaggctgttgtctacgatgagacaatc
ccggacatccagaagaataggattgtgatggtcttttctgagatcgacaagaggttggta
gacggcgcggacgagcatctctcaatactggatcttgccctacggatctcggggattttg
gctgggaggtag
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