Thermothielavioides terrestris: THITE_2113227
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Entry
THITE_2113227 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
THITE_2113227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2113227
03009 Ribosome biogenesis [BR:
ttt03009
]
THITE_2113227
Messenger RNA biogenesis [BR:
ttt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
THITE_2113227
Ribosome biogenesis [BR:
ttt03009
]
Eukaryotic type
Pre-60S particles
RNases
THITE_2113227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
11520578
NCBI-ProteinID:
XP_003652128
JGI:
Thite2_2113227
UniProt:
G2R211
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All DBs
Position
2:complement(join(3455113..3455624,3455784..3455940,3456024..3456098))
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AA seq
247 aa
AA seq
DB search
MSDNSRALEPRPPRRQDALVWIDCEMTGLDPDTDAIIEIYCLITDGQLELLDEAGWGVVV
HQTRERMEMMDEWCTRVHGESGLTAAVIESTVTPEQAADGLLAYIQKYVPERGSALLAGN
SVHADRAFLRKPPYSKVLDHLHYRILDVSSLKEAARRWRYVKRPVDHCPSSQSMVAAWMQ
LHLVHHLAAAGSRRLSRSNETLIWKNRPEVAAAAPRKKGLHQAKQDIIESIKEARYYRTA
IFKAGEP
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaacagccgtgccctggagccgaggcctcctcgacgacaagatgccctggtt
tggatcgattgcgagatgacggggctcgacccagatacggatgccattatcgagatctat
tgcctcatcactgatgggcagctcgagctgctcgacgaagccggctggggcgttgttgtc
caccagacgagagagcgcatggaaatgatggatgaatggtgtacccgcgttcatggcgag
agcggtcttactgcagccgtcatcgagtcgacggtgacacctgagcaggcggctgacggg
ctcctcgcctacattcaaaagtacgtccctgagagagggtccgcgctgctggccgggaac
agcgtacacgccgacagggcttttcttcggaagccgccatacagcaaggttctcgaccac
ttgcattaccggatcctggacgtcagcagcctcaaggaagccgcacgaaggtggcggtac
gtgaaacgcccggtggatcattgtccctcgtcccagtccatggtcgcagcgtggatgcag
ttgcacttggtgcaccacctggcggcggcgggatctcgtcgtctctccagatcgaacgag
acactgatttggaagaacaggccggaagttgccgcagcagctccccgtaaaaaaggtctt
caccaggctaagcaggacatcatcgaaagcattaaggaggccaggtattacaggacggca
atcttcaaagcgggtgagccctaa
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