Thermothielavioides terrestris: THITE_2113792
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Entry
THITE_2113792 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03013
Nucleocytoplasmic transport
ttt03015
mRNA surveillance pathway
ttt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
THITE_2113792
09122 Translation
03013 Nucleocytoplasmic transport
THITE_2113792
03015 mRNA surveillance pathway
THITE_2113792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2113792
03041 Spliceosome [BR:
ttt03041
]
THITE_2113792
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
THITE_2113792
TREX complex
THITE_2113792
Spliceosome [BR:
ttt03041
]
Complex C
Other components
EJC/TREX
THITE_2113792
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
THITE_2113792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
11514984
NCBI-ProteinID:
XP_003652370
JGI:
Thite2_2113792
UniProt:
G2R487
LinkDB
All DBs
Position
2:complement(join(4444953..4444969,4445055..4445613,4445685..4445751,4445806..4445854,4445923..4445954,4446013..4446047,4446382..4446450,4446564..4446617))
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AA seq
293 aa
AA seq
DB search
MDRVLDRSLDEILAERKQNNRSSRGGRRRDRSDYPRDGVRKPFRDDAPRDLDSEWVHDKF
EDYGRRSAPRRRRHSPEPSSDSRGAKLRVDNIHYELTQEDLEGLFSRIGPLIKLEMKYDR
AGRSEGTAFVTYESHRDAAEAIKEFDGANAAGQPIRLTLLPTGPRRNPFDTAVLPGRPLA
ERITLPADRARSLSPRRESDEEAARRGVDRYRPHDGGNGRRSRSPVAGGGGSRRRDGGGR
RPGARREGGGAGRRGERGGAGEKVGRDGRPKKTQEELDAEMEDYFAGSAGMWI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtgtactcgaccgcagcctcgacgagatactggccgaacggaagcagaacaat
agaagttctcgcggcggccgtcgtcgcgacagatccgactaccccagagatggcgtcaga
aagcccttcagagacgatgctccgcgggacctcgattccgagtgggttcatgacaagttc
gaggattatggccgacgctccgctccaagacgtcgtcgacattcgcccgagccctccagc
gactctaggggtgccaagctcagagtggataacatccactatgaactgacgcaggaagat
ctggagggcctcttctcccgcatcggcccgctcatcaagctcgaaatgaagtacgaccgc
gcgggccgctccgagggcaccgccttcgtcacgtacgagtcgcaccgcgacgcggccgag
gccatcaaggagttcgacggcgccaacgcggccggccagcccatccgcctcacgctgctg
cccacgggcccgcgccgcaaccccttcgacacggccgtcctccccggccggccgctcgcc
gagcgcatcaccctgcccgcggaccgggcgcggtcgctctcgccgcgccgcgagtcggac
gaggaggccgcgcggaggggcgtcgatcggtatcggccgcacgacggcgggaacggccgc
cggtcgcggagtccggtcgcaggcgggggtggcagtagacggcgggatggcgggggcagg
cggcccggcgcgcggagggagggcggtggtgcgggtagacggggcgagaggggtggcgct
ggtgagaaggtggggagagatgggcggcccaagaagacgcaggaggagctggacgcggag
atggaggactactttgctggcagcgcggggatgtggatatga
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