Thermothielavioides terrestris: THITE_2114307
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Entry
THITE_2114307 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THITE_2114307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2114307
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
THITE_2114307
mRNA degradation factors
5'-3' decay
Decapping complex
THITE_2114307
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
11517976
NCBI-ProteinID:
XP_003652638
JGI:
Thite2_2114307
UniProt:
G2QZ66
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All DBs
Position
2:complement(join(5350029..5350317,5350378..5352629))
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AA seq
846 aa
AA seq
DB search
MSFSGFDTNRHNPAATGFSQAHDPFAGLSGREDEGDALEFEDTYDGLGDQLEETGDAFND
DTFGDTAGLSSAPVGKDFDFFGQTAKVANAIEEEHVRFNRQQPVAKASQSASQPTAQSQA
PASGASSYGYAPQPASHKPVRTGYEKYSSEPVAELQVDAALWGVAPKKQTQPAPAPPPVT
TPSSIPPGRKVLSVEEVEAQLRAQAKLSAQQATAPSTASQPAAAASIAAPQAPQQTLYEQ
GYQFSQAEPPRKDQNLATGHGHPVSILQRPQATQVPSPQPVAQAAAHLRQQPPAPMQPTQ
ILQNPNRLSGDAARLGIRQHPSPAVPGSYPTHPVHRQQGSFSRQPPIITHPSQLAQLSEE
EKAAYLEQEAKRAKRNHKIFLMSRDNGIMTPQDKSFVTRIQLQQLVAAAGNPNEHGTDES
LAEDFYYQVHSQIQGGQRQHPSQPLNNFAQTYLFQTGSRMGGLRRHHRGPENHVQRMEQQ
VQRAVEAAKNKPKNKQLVIEGSLGKISFSNAKTPKPLLNIKRTESTGEAHRPGSAHKQVS
HGGDRKSDLRSIELIYATLMTLEDHDRAMPPPPASEADAESIQKFVAWNSEAQILNGKLW
ESLRVHDHPPEGRVHPFIAILSYSKGMKAMQRISRHLTHEQRTTILTLIVVNLDSLDVVR
NAQVTSDATQLNAAMRETIELFSGAVMSTLFNILNELDLDLVAGVLGLVCTRNVDVIAKS
RIGAGMLTMILSRAEIIKHGGGGNEAAWRSWDVTYTQFFDLLEPTLPHIFPGPVTASDDI
YVWQLLAAIGIGAGPDQQQRLVLAVKDRVMDTVALAKTLPQDLAAQRLQNVNLFMRSIGL
DVELLQ
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttctccggctttgatacaaaccgccacaacccagcggccactggattctcccag
gcgcacgacccattcgccgggctctctggtcgcgaggacgaaggggatgccctcgagttt
gaagatacttatgatggcctgggggatcagctggaggagaccggcgatgctttcaatgac
gacaccttcggcgacactgccgggctgtcgtcagcgccggtaggcaaggacttcgacttc
ttcggtcagacggccaaagtcgcgaatgccatcgaggaggagcatgtccgcttcaaccgc
cagcaacccgtcgccaaggcttcccaatccgcctctcaaccaactgcgcaatcccaggct
cccgcatctggcgcatcgtcgtatggctatgctcctcagccggcttcccacaagcctgtg
cggactggttacgagaagtacagcagcgagccggtcgctgagctccaggtcgatgcggca
ttgtggggcgttgcccccaagaagcagactcaaccagctcctgctccccctccggtgacc
acaccttcctcgatcccccccggccggaaagtgctaagtgtggaggaggtggaggctcag
ttgcgagcccaggccaaattgtccgcgcagcaggctactgctccgtccactgcgtcccag
ccggctgccgctgcatctattgccgcgccgcaggcgccccagcagacgctgtatgagcaa
ggctatcagttctcgcaggccgagccacctcgaaaagatcaaaacttagctaccgggcat
ggacatcctgtcagcatactgcagagaccccaggctacgcaggtcccttctcctcaacct
gtcgcccaggcagcggctcatctgcgccagcagcccccggcccctatgcagcctacccag
atcttgcagaaccctaaccgcctgtcgggagatgcggccagactcggcatccgtcagcac
cctagccccgccgtgccaggctcctacccgacgcatcccgtacacaggcagcagggctcg
ttctcccgccaacccccgattatcacgcacccgtctcagctcgcccagctcagcgaggaa
gagaaagctgcgtatttggagcaagaagcaaagcgagcaaaacgcaaccacaagatcttc
ctcatgtctcgcgacaacggcatcatgacgcctcaggacaagagctttgtgactcgtatc
cagctgcaacagctcgttgccgctgccggaaatcccaacgagcacggcacggacgagtcc
ctcgccgaggatttctactaccaagtgcacagccagatccagggcggccaacgtcagcat
cccagccagccgctgaataattttgcgcagacatatctcttccagacgggcagccggatg
ggcggcctgcgtcgtcaccaccgcggcccggagaaccacgtgcaacgcatggagcagcag
gtccagcgtgccgtggaagcggccaagaacaagccgaagaacaagcagctggtaatcgaa
ggcagtctgggcaagatctcgttcagcaatgccaagacacccaagccgctgctcaacatc
aagcgcaccgagagcactggcgaggcacatcgccccggaagcgcgcacaagcaggtttcc
cacggcggcgacaggaagagcgacctacggtccatcgaactcatctacgcgacacttatg
acgctcgaagaccacgaccgcgcgatgcctcctcctcctgcgagcgaggccgatgccgaa
tccatccagaagttcgttgcatggaacagcgaggcacagatcctcaacgggaagctgtgg
gagagcctccgggtccacgaccatcccccggagggccgcgtccaccctttcatcgccatt
ctttcgtacagcaagggcatgaaggcgatgcagcgcatctcgcgccatctcacccatgag
cagcgcacgaccattcttaccctgatcgtcgtaaatctcgacagcctagatgttgttcgc
aacgctcaggtgacgtctgatgcgacgcagctgaatgccgccatgcgggagacgatcgag
ctcttctccggggccgtcatgtcgactctgtttaacatcttgaacgaacttgacctggac
ctggttgccggcgtgctcggccttgtgtgcactcgcaacgtggacgtgatcgcgaagagc
agaatcggtgcaggaatgctaaccatgatcctgagtcgtgccgaaatcatcaagcatggc
ggaggcggcaatgaagcagcctggcggtcatgggacgtgacgtacacgcagttcttcgac
ctgctcgagcccacgctgccccacatcttcccgggacccgtcaccgccagcgacgatatc
tacgtgtggcaacttttggccgccatcggcatcggcgccggccccgaccagcagcagagg
ctggtccttgccgtcaaggaccgtgtcatggacaccgttgctctcgccaagaccctccct
caggacctagccgcccagcggctccagaacgtgaacctctttatgcgctcgattggtttg
gacgtcgagctgctccagtga
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