Thermothielavioides terrestris: THITE_2114500
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Entry
THITE_2114500 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K14312
nuclear pore complex protein Nup155
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
THITE_2114500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2114500
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
THITE_2114500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
11515234
NCBI-ProteinID:
XP_003652750
JGI:
Thite2_2114500
UniProt:
G2R039
LinkDB
All DBs
Position
2:complement(join(5709051..5709926,5710003..5713151,5713235..5713541))
Genome browser
AA seq
1443 aa
AA seq
DB search
MNPATPMRPIPGAFVNTPAPGPNTVRRRLFEEAAGAGAPRTMVSASGPVVSTLGSGQPDA
PPGMIAPSQAREELPPVAKAAQVVNQTLQLDESYPDLDSYCRPGASSDYNLQFPDSPWAP
FHKVSMYQIPDQVFERLNQSAVSTRIGLFASINYAWASIDNSLFLWDYTHPDPELIGYEE
ATHTITAVALVPPKPGVFVSSITHILVVATTTEIILLGVSAAPTPSGSKTVTLYQTKMSV
HRGGSDVSYIVGTATGRIFLGGSTDTDIHELFYQQEERWFSSRCSKINHTHPGWSSVVPV
LPFGQRQQEWLIGLVVDDTRNLLYSLSNRSTIRTYHMESPEKLIRVIEKDKTSCLRDFAH
MADRSPLFTDQTNIVSLSPIPATEASKLHLMALTNTGCRLFLSATSSASYTLGGSTSLAP
QSMQLQFVKFPPKELTSSRSRASTDQGSEPPVDKTSRALDPSGFGVRFAPGYFFDVVRKQ
ASEDALFVSAPDTGKIKSTTLTSTLKYFEQGTWIDLPTGNRILEVGLTTAPFSAANQPLG
FGNELAVQFDKAPGEFAVLTNTGVHVVRRRRLVDIFADALRTCSGEEDLEKHVRQFIAQY
GRVETISAALAVACGHGSDLRTGAGRAADHKTENLARMAFVEYGGQPRLAELDGKQAVSE
VVQLSSRHDALALYLTRLIRMLWKSKVVTTKTDASKGSLAVSSTIPTAKLVAIQENVERL
RNFLETNKSTIQGLAGPSERLFSRQDEIANQKEHQALHALRKLMESVSEGISFVLMLFDE
RVSDIYARLDPGSQQQLRDLTYEQLFSQTPGKELAKVLVKAIVNRNIASGANVETVADAL
RRRCGSFCSPDDVVTFKAQEQLQRASEQVHNPNMLRTLLAESLRLFEQVAGGLSPANLRS
AVEQYVELKYYAGAIQLCLAVAQQKDRGNTALSWVNDGKPANDARQKAFAERKVCYTLIH
EVLDKLEVAFAGEPEMVDGRPTLAATKRMEAYSVVNDSSDEVFHSDLYEWYIEKNWTDRL
LSIDSPHVVTYLQRLAETNYQHAELLCRFYTHRSRFFEAAQVQATLAKSDLNIGIKDRIT
LLSRAKGNASVNTIGVSRQQQQLLNHEVTELLEIAHIQDDLLERLRADPRISPEKLPDIE
EALDGPVKSVTELYNEYADQAGYFDLCLLIYHAADYHNPRVIMDTWQRLIEQTAFETEQR
QEHWRLARTGQPLPEGAPPLTGEPPLPYESVSQQIQLIAHRTSLDSLVFPVDALLPEVCR
FAVNRAQDESVGADPCWPVRLFLGLGVPHALVVQVLENVLDAQEAPFTGRRRKAVVQWIA
AAVEAWVREVERRAAGAVAGGKVGAAGAGGGGVGGGAGGAGSEGFIGAWVSELLARADEA
LVQITPSTAAAGAAAGGGAARAAAASSAEAEELLELRRIIKGLKRSVDGILGGEGLIGGS
VFR
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagccacgccgatgcgcccgattcccggcgccttcgtcaacacacctgcgccg
ggcccaaatacagtcaggcgccgactcttcgaggaggcagcgggtgctggggccccgcgc
acaatggtcagcgcatcagggccggttgtgagcactcttggctcgggccagccagacgct
cctcccggcatgattgccccttcacaggcccgcgaagaactgccgccggttgcgaaggcc
gcccaggtcgtcaaccagacgctgcagctcgacgagagctaccccgacttggattcctat
tgcagacccggcgcgtcttccgactacaacctccagtttcccgattctccgtgggcaccc
tttcacaaggtgtcgatgtatcagatccccgaccaggtgtttgagcgactgaaccagagc
gccgtctcaacaaggatcggcttgtttgcgagcatcaactacgcctgggcttcgatcgac
aactcgctcttcctgtgggactacacacatcctgaccccgagctcatcggctacgaggaa
gccacccacaccatcaccgccgtcgctcttgtgccccccaagccaggcgtgttcgtcagc
tcgattacccacatattggttgtggcgaccaccaccgaaatcatcctgctcggcgtctct
gctgctcccacgccctccggttcgaagacggtcacgctgtaccagaccaagatgtcggtc
catcggggaggaagcgacgtcagttacatcgtcggcaccgcaacaggtcgcatctttctc
ggcggctcgacggacacggacatccacgagcttttctaccaacaggaagagaggtggttc
tcgagcaggtgcagcaagatcaaccacacgcacccggggtggtcgtcggtcgttcccgtg
ctgccattcggccagcggcaacaggagtggctgattggccttgtcgttgacgacacccgg
aatctgttatattcgctctccaaccgctcgaccatccggacgtatcacatggagtcgccc
gagaagcttatcagggtgatcgagaaagacaagacaagctgtctgcgcgatttcgcccac
atggccgaccgatcgccgctctttaccgaccagacgaacatcgtctccttaagccccatc
cccgccaccgaagcctcgaagctgcacctgatggctctcacaaacactggctgccgcctc
ttcctcagcgccaccagctctgcttcgtacaccctagggggctccacaagtctcgcgccg
cagagcatgcagctccaattcgtcaagtttccgcccaaggaactgacctcctcccgcagc
agagcctcgacagaccagggaagcgaaccgccggtggataagacctcgcgagccctcgac
cccagtgggtttggtgtgcggttcgcgcccggctatttcttcgacgtcgtccgcaagcaa
gccagcgaggatgccctcttcgtgtctgccccggacacgggcaagatcaaatccaccacg
ctcacgtcgactctgaaatacttcgagcaggggacgtggatcgacttgccgactggcaac
cggatactcgaggtcggcttgacgaccgcccctttctctgcagcgaatcaacctctgggc
ttcggcaacgagcttgccgtccagttcgacaaagctccgggggagttcgcggtgctcact
aacactggagtccacgtggttcgccggaggagacttgttgatattttcgctgatgctctg
aggacttgttcgggcgaggaagacctcgagaaacacgtgcgccagttcatcgcccagtac
ggccgcgtcgagacaatatcggccgccctggctgtggcttgcggccacggtagcgacttg
cggaccggcgctggcagggcggcggaccacaagaccgaaaacctggcacgcatggctttt
gtggagtacggcggtcaaccgaggctcgccgagttggacgggaagcaggccgtttccgag
gtcgtgcagttgtcctcgcgtcacgacgccctagccctgtacctcactcgcctgatcagg
atgctgtggaaatcgaaggttgtcacgacgaagacagatgcttcgaagggctccctggcc
gtctcctcaaccatccccactgcgaagcttgtcgcgatccaagagaacgtcgagaggttg
cggaatttcctagaaacgaacaagagcacgatccaggggctcgccggcccgtcagaacgt
cttttcagcaggcaagatgagattgccaaccagaaggagcatcaggctctgcacgcgcta
cggaaactgatggagagcgtctccgaaggcatctcgttcgtcctgatgctgttcgacgag
cgggtctcggacatctacgcccgcctcgacccggggtcccagcagcagctccgggacctg
acgtacgagcagctcttctcgcagacccccggaaaagagcttgccaaggtgctggtcaag
gcgatcgttaaccgcaacattgccagcggcgccaacgtcgagaccgtcgcggacgctctg
aggcggcgatgcggaagcttttgctcccctgacgacgtcgtcaccttcaaggcccaggag
cagctgcagcgcgctagcgagcaggtccacaatcccaacatgcttcgcaccctcctggcc
gagagcttgcgcttgttcgagcaggtcgccggtggtctttctccggctaacctccggagc
gccgttgagcaatatgtcgagctcaaatactacgctggtgcaatccagctgtgtctggcg
gtcgcgcagcagaaggaccgggggaacaccgcgctatcgtgggtcaatgatggcaaaccg
gcgaacgatgcccgccagaaggcgttcgccgagcgcaaggtttgctacaccctgatccat
gaagtcctggacaagctcgaggttgcgtttgccggcgagccggagatggtcgacggtcgg
ccaaccctcgcggcaacgaagcggatggaggcctactcggtagtcaacgactcgagcgac
gaggtgttccactccgacctctatgaatggtacatcgagaagaactggaccgaccgtctc
ctttccatcgattcgccccatgtcgtcacatatctgcagcggctggcagagactaactac
caacatgccgagctgctctgccgattctacacacaccgcagccgcttctttgaggccgcc
caggttcaggcgaccctggcaaagtcggacctgaacattggcatcaaggaccgcatcacg
ctgctcagccgcgccaagggcaacgccagtgttaacaccatcggcgtcagccgtcagcag
caacagctgctcaaccacgaggttacggagctgctcgagattgcgcacattcaagacgac
ttgctcgagcggctgagggcggatccccgtatctccccagagaagctgcccgatatcgaa
gaagcgctggatggacccgtgaaaagcgttaccgagctctacaatgagtacgccgaccaa
gcaggctacttcgacctctgcctcctcatctaccacgcggccgactaccacaacccgcgc
gtcatcatggacacctggcagcgcctgatcgagcagacggccttcgagaccgagcagcgc
caagaacactggcgcctcgcccggaccggccagcccctgcccgagggcgcgccgccgctg
acgggcgagccgccgctgccgtacgagtccgtgtcgcagcagatccagctcatcgcccac
cgcacgtcgctcgacagcctcgtcttccccgtcgacgccctcctgcccgaggtctgccgc
ttcgccgtcaaccgcgcccaggacgagtccgtcggcgccgacccctgctggcccgtccgc
ctgttcctcggcctcggcgtgccccacgccctggtcgtccaggtgctcgagaacgtcctc
gacgcccaggaggcccccttcaccggccggcggcggaaggcggtcgtgcagtggatcgcc
gccgccgtcgaggcctgggtcagggaggtcgagcgccgcgccgccggcgccgtcgccggt
gggaaggtcggtgctgctggcgctggtggtggtggtgttggtggtggcgccggcggcgcc
ggcagcgaggggttcatcggcgcgtgggtcagcgagctgttggcgagggcggatgaagcg
ctcgtgcagattaccccgtccaccgctgcggcgggcgctgctgctggtggtggtgccgcc
agggcggcggcggcaagttcggcggaggcggaggagctgctggagctgaggaggatcatt
aaggggttgaagcggagcgtggatgggatcctgggcggcgagggcctgattgggggcagc
gtgttccggtga
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