Thermothielavioides terrestris: THITE_2115125
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Entry
THITE_2115125 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THITE_2115125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2115125
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
THITE_2115125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
11514676
NCBI-ProteinID:
XP_003653091
JGI:
Thite2_2115125
UniProt:
G2R337
LinkDB
All DBs
Position
2:join(6824505..6824634,6824687..6825417)
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AA seq
286 aa
AA seq
DB search
MTDRRRINGPAGATIPPVFDDAGFQELKTVKTRSRPPNVLRKMFLKTGVTPSASGSAYLE
ITTSGKPGVSGLKLSCSVHGPRSLPRSSPFSPHMVLSTHVKYAPFATKQRRGYLRDPSER
DLGIHLETALRGAIIADRWPKSGVDIIISIIEGDQDRESSQSQGDEVWDMMNALSGCITV
ASAALADAGIDCVDTVAGGVAALVQDAGDDSKPSIVVDPLPSEHERILAACCVAYLPTRD
EVTNLWFRGDLPASDMDLYTSLVEQGIQASKNANRVLVECLSETVG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacagaagacgaatcaatggccctgccggggctacaatacctccggttttcgat
gatgccgggtttcaagagctcaaaacggtgaagaccagatcacgtccgccaaatgtactg
cggaaaatgttcctcaaaacgggtgtgaccccgtcagcgtctggatcggcctatttggaa
attaccacgtccgggaaacctggcgtgtcggggctgaagctgagctgctccgtccacgga
ccgcgatcgctcccgagatcgagtcccttctctccacacatggtcctctctacccacgtc
aaatatgctccgttcgcgacgaagcagaggcgtggctaccttcgcgaccccagcgagcga
gacctcggcatccacctcgagaccgccctccgcggcgccatcattgccgaccgatggccc
aagagcggcgtggacatcatcatctcgatcatcgagggagaccaggaccgggaatcgtct
caatcccaaggcgacgaggtgtgggacatgatgaacgccctgagcggctgcatcaccgtg
gcctcagccgcgctcgccgatgccgggattgactgtgtcgataccgtggcaggcggggtg
gctgctctcgtccaggacgctggcgacgactcgaagcccagtatcgttgttgatcccctc
ccgtctgagcacgaaaggatcctcgcagcctgctgcgtcgcgtacctccctacgcgagac
gaggtaacaaacctctggtttaggggcgatctgcctgcctccgacatggacctctacacc
agccttgttgaacaggggatacaggcgtcaaaaaacgccaaccgcgtgctcgtcgaatgt
ctcagcgagactgtcggatga
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