Thermothielavioides terrestris: THITE_2115141
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Entry
THITE_2115141 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
THITE_2115141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2115141
03041 Spliceosome [BR:
ttt03041
]
THITE_2115141
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
THITE_2115141
Spliceosome [BR:
ttt03041
]
Complex B
Other components
Prp19-related factors
THITE_2115141
Complex C
THITE_2115141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
Mad3_BUB1_I
TPR_8
RPN7
TPR_2
ARM_TT21
NRDE-2
Motif
Other DBs
NCBI-GeneID:
11514685
NCBI-ProteinID:
XP_003653100
JGI:
Thite2_2115141
UniProt:
G2R3F4
LinkDB
All DBs
Position
2:join(6844238..6844285,6844343..6844513,6844566..6846818)
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AA seq
823 aa
AA seq
DB search
MGASLPSSRQPDLALVSEDDFPYEQDIRRNPGSTKPWLAYIEYKLQHGTVQEQAFVMERA
CVQLPRSYKLWKMYLLFRTKHVSKLNAAIFAAEYQKVNALFERALILLNKMPRIWEMYLK
FLMQQPLVTFTRRAFDRALRALPITQHNRIWALYRPFANSAEGMTAVKIWRRYMQVHPED
AEDFIELLVQTGLHTEAVHKYIEILDNPRFRSKNAKGHYELWSEMVDLLVEHAVDIETGH
ETGIDVEGIIRSGIERFSDQRGKLWCGLATYWIRRGNFERARDVFEEGITTVMTVRDFTL
VFDSYAEFEESIIGALMEVASARAEKGVVDETADFDLDIRMMRFEHLMDRRPFLLNDVLL
RQNPNNVAEWEKRVALWGDNKEEVVQTYTDAIAAIQPKKAVGAFHQLWANYAKFYEKGGD
LRNARIIMEKAVKVPFKSVAELADMWIEWAEMELRNENFDEAVRIMAKAVQAPKRSTVDY
FDETLSPQQRVHKSWKLWSFYVDLVESVGSLEETRKIYERIFELRIATPQTVVNYANLLE
EHKYYEESFKIYERGLDLFSYPVAFELWNLYLSKAVDRKISIERLRDLFEQAVLDCPPKF
AKVIYLMYGNLEEERGLARHAMRIYERATRAVSDEDRADMFNFYITKSASNFGLPSTRPI
YERAIATLPDNEARDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTNPDFWAKWEDFE
VHHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQALARSQQQKSQNGGEQVDQEVADAMEQ
LERQARAPAGFVAASEGIKGSVPSQPAEVANPDAIELDEDTNE
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcaagccttccctccagccgccagccagacctggctctggtctccgaggacgac
ttcccctacgagcaagatatccgacgcaatccgggaagcaccaaaccgtggctggcctac
atcgaatacaagcttcagcatggcacggtacaggagcaagcgttcgtcatggagagggca
tgcgtccagctgccccggtcgtacaagttgtggaagatgtatcttctattcaggaccaag
cacgtctccaagctgaacgccgccatctttgctgccgaataccagaaagtgaacgccctg
ttcgagcgggcgcttatccttctcaacaagatgcccaggatatgggagatgtacctcaag
ttcctgatgcagcagcccctcgtgactttcacgcggcgcgccttcgaccgtgcgctccga
gcgctcccaatcacccagcacaacaggatatgggcattgtaccggccgttcgcgaattcg
gcagaaggcatgacggcagtcaagatctggcgtcgttacatgcaggtccaccccgaagat
gccgaggacttcatcgagttgctggtccaaacggggctgcacaccgaggcggtccacaag
tacatcgagatcctcgacaatccgcgcttccgaagcaagaacgccaaggggcactacgag
ctctggagcgaaatggtggatcttctggtcgagcacgctgtcgacatagagacgggccac
gagacgggcatcgacgtcgagggtatcatccggagcggcatcgaacggttcagcgaccaa
aggggaaagctttggtgcggcctggcgacttactggatccggcgcgggaacttcgagcgc
gcgagggacgtgttcgaggagggcatcacgaccgtcatgacggttcgagacttcaccctc
gtgttcgactcgtacgccgaatttgaggaatccatcattggcgcgttgatggaagttgcc
tctgcgcgggccgagaagggcgtggtagacgagacggccgacttcgacctggacatccgc
atgatgcgcttcgagcatctcatggaccgtcggcctttccttctgaacgacgtcctcctc
cggcagaatcccaacaacgtggcagaatgggagaagcgggtcgccttgtggggcgacaac
aaggaagaggtggttcagacgtacacggacgccattgccgccatccagcccaagaaggcg
gtcggcgcattccaccaactatgggcgaattacgccaagttctacgaaaaagggggggac
ttgcggaatgcccggatcatcatggaaaaggcggtcaaggtgccgttcaaatcggtagcc
gagctggctgacatgtggatcgaatgggccgaaatggagctgcggaacgagaacttcgac
gaagccgtccggatcatggcgaaagcggtgcaagcgcccaagaggtcgacggtagactac
ttcgacgagacgctatcgccgcagcaacgggtgcacaagagctggaagctgtggagtttc
tatgtcgacctcgtggagagcgtaggctcgctcgaggagaccaggaagatctacgaaaga
atatttgagctgcggatcgccacgccgcagaccgtggtcaactacgcaaatctcctcgaa
gagcacaaatactatgaggagtcgttcaagatatacgagcgcggcctcgacctcttcagc
tacccggtggcctttgagctctggaatctctacctgtcaaaggcggtcgaccggaagatc
agcatcgagcgactgcgagacctgttcgagcaggcggtgctcgattgcccgcccaaattc
gccaaggtcatctacctgatgtacggcaacctcgaggaggagcgcgggctggcgcgccac
gccatgcgcatctacgagcgggccacgcgcgccgtttcggacgaagaccgggcggacatg
ttcaacttctacatcacaaaatcggcatccaacttcggcctgccgtcgacacgccccatc
tacgagcgggccatcgcgacgctgcccgacaacgaggcacgcgacatgtgcctcaagttc
gccgacatggagaagaggctgggcgagatcgaccgggcgagggccatctacggtcacgcg
tcgcagttctgcgacccgcgcacgaaccccgacttctgggccaagtgggaggattttgag
gtccaccacggcaacgaggacaccttcaaggagatgctgcgcatcaagcggagcgtccag
gcgcagtacaacacggacgtcaacttcatcgcgtcgcaggcgcttgccaggagtcaacag
cagaaatcgcagaacggcggcgagcaagtcgaccaggaagtagccgacgccatggagcag
ctggagaggcaggcgcgcgccccggccgggttcgtggctgcttcggaagggatcaaggga
agcgtccccagccagccagccgaggtcgccaaccccgatgccatcgagctcgacgaagat
acaaacgaatga
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