Thermothielavioides terrestris: THITE_2115364
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Entry
THITE_2115364 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THITE_2115364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2115364
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
THITE_2115364
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
THITE_2115364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
11514892
NCBI-ProteinID:
XP_003653207
JGI:
Thite2_2115364
UniProt:
G2R4C7
LinkDB
All DBs
Position
2:complement(join(7271933..7272004,7272077..7272422,7272494..7273258,7273834..7273984,7274081..7274174))
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AA seq
475 aa
AA seq
DB search
MPGGFGGQQQQQQQQQPAGRAVSNRLPNGKIGPVGNGAGWFGGMPMGGSASVPPGAARQI
GGNVSFAQSLAGSQPATPLDLSEFPSLSNTSQLSSAAQSSMWSAQGPRSIGGGVHRGAGT
PLSQQTQQDDLFASRLSSAHGSFRFGNQGSVPQASQTQSGLADDFPPLNRAANGEIGAHD
RSGNLVSNLGFGGQASAPGSAMHANRAGNGLLSALSATSRAADVRSPAAIARPQDSRTPA
GEDEQRQKPAGYREDAADAVGGRNPLGAIGNDPPTAKVKEEEKAAASQVQDPLEGMAPID
KWGIKGLRTLMNNFPDYNALTCGLDPSLLNVDMRSSDAISTKIYSVFDDAPPRPPVPNFR
LPDCYQVKNVQPIEAKISSFNEETLMWIFYSCPRDIKQQMAAIELNNRNWRWHKKYQFWL
TKDDIMAPQTLGPGHERGYYIVWDAANWRKERRELVLQYVDLDTTPTTQLQGLGA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcgggtttggagggcagcagcagcagcagcagcagcaacagccagccggccgc
gccgtgtcgaataggttaccgaacgggaagataggaccggtaggcaacggggcagggtgg
ttcggcggcatgcccatgggaggcagcgcgagcgtgccaccaggcgcggccaggcaaata
ggggggaatgtcagcttcgcgcagagcttggcgggctcccagccggcgacgccgttggat
ttatcggagtttccatctctgtccaacacctctcagcttagctcggcagcccagtcatcc
atgtggtcggcacaagggccgcgaagcattggcggaggggtgcatcgtggagcagggacg
ccgctctcgcagcaaactcagcaggatgacctctttgcatcgcggctctcgtccgcccat
ggatctttcaggtttggaaaccaagggagtgttccccaagcatctcagacgcagtcaggc
ctggccgacgattttccgccgctcaaccgggcggcgaatggggagattggcgcccacgat
cgcagcgggaacctggtgtcaaacctggggtttggtggccaggcttcggcccctgggtcc
gccatgcatgcgaaccgggcagggaacgggttgctgagcgcgctctcagcgacgtcgcgc
gctgccgacgtccgctcgccggctgcgatagcacggcctcaagattctcggacgccggct
ggcgaggacgagcagcgtcagaagccggccggctatcgtgaggacgcggcggacgcggta
ggcgggagaaatccgctaggagcgatcggcaacgaccctccaacggctaaagtcaaggag
gaagaaaaggccgcggctagccaggtccaagatccgctggagggcatggcgcccattgac
aaatgggggatcaagggtctccggaccttgatgaacaatttcccggactacaacgcgctg
acgtgcggccttgacccgtctcttctgaacgtggatatgcgttcatcggacgccatctca
accaagatttattcggtgtttgacgacgcgcccccaaggccaccagtaccaaactttcgc
ctacccgactgctaccaagttaagaacgtgcagccgatcgaggccaaaatctcgagcttc
aacgaggagaccctgatgtggatcttctacagctgcccgcgggacatcaagcagcagatg
gcggccatcgagctcaacaaccggaactggaggtggcacaagaaataccagttctggctc
acaaaggacgacatcatggcaccgcagaccttggggcccggccacgagcgggggtactac
atcgtctgggatgcggccaactggcgcaaggagcggcgggaactggtgttgcaatatgtg
gatctcgatacgactcccacaacgcagctgcagggtctgggggcatga
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