Thermothielavioides terrestris: THITE_2115730
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Entry
THITE_2115730 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K14327
regulator of nonsense transcripts 2
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03013
Nucleocytoplasmic transport
ttt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
THITE_2115730
03015 mRNA surveillance pathway
THITE_2115730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2115730
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
THITE_2115730
mRNA cycle factors
P-body specific factors
THITE_2115730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
DUF6247
Motif
Other DBs
NCBI-GeneID:
11518733
NCBI-ProteinID:
XP_003653360
JGI:
Thite2_2115730
UniProt:
G2R5E4
LinkDB
All DBs
Position
2:complement(join(7899097..7899103,7899388..7899689,7899749..7900054,7900121..7900557,7900621..7900912,7900967..7903005,7903073..7903117,7903180..7903198))
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AA seq
1148 aa
AA seq
DB search
MDRARRHELRDLNRRAWDGEKDLFPVASSLDSTMKKNTAFIKRLRTAISPANLPTFLQEI
KTVSLSKYLSEIVSACHEGLSKLKSPGEIEAGVEIVSALHQRFGPAEFTSYLGWYLGRSL
ATPDKSVLKALSPEAREKEEKDRLVRQRVLLRVVTELWLVEVLRTLDDVKRPDDATNGTT
GKPTEVKSRASAKGGAAEPFPLEVLKDLLGHDREHVNLPLLVAFVKAFSWDVLGVKAAGS
EGRKTVEEDGATRTEEGTEDQEGEPAPDSDGPAFTPPELQERFRNVLKRYFEDLKGHLVR
DQKAIYTQSRKNAEAYVKSGEVFEDRQANFEKQVKAQERLVANAQVIADVIGAEMPDLKD
HDDPSSGASGTIGIVKAGEYLRGQGDGAGIWEDEEERRFYENLVDLKGKVPAILLEEVKK
KKPEADEQVGKKIDPAELAEAPKAPDAAADDQSVAIANKTIGAQVDALLARLPDLTTKDA
IDQMAIDFCYLNSKASRNRLIKALTDVPKGRGDLLPCWSRLVATLGQYMTDIPKGLVEYL
DAEFRSLQRRKDKEFLGQVRLSNIRYLAELTKFGIVPEHVVFHCLKVSLDDFSRMNIEII
CNLLENCGRYLLRNPETSPRMASFLETLQRKKSVQHIGAAERMLIENAVYYVDPPQRPAI
QQKERTPMELFIRKLIYSDLNKQSYNKVLRQIRRLHWEEKEVVAVLHKVFSKPGKVKYGN
IHLLAILLSAIYRYHPDFVIGVVDTLTESIAFGLEQNDFKFNQRRLAEVKYLGELYNYRM
LEHPVIFDTMYKIMTFGHGGPPVPGRINPFDQPDDFFRIRLISTLLETCGMFFNKGAAGK
KLDYFLSFFQYYIHTKNPLPMDIEFLVQDIFALTRPQWKLASNLEEASKVFHLAIIQDQK
TSGLDKVVEQDDGTSEVSSDDDVPLAEQDDEDDMGSEEAEAEAEDADQNPSYRDSDSEEE
AIVVTREEEEIDPEDEAEFDREYAKIMAESFETRKFQPKQQFDIPLPIRPKNRDAPSGSE
PAENGAGAPGSTMAFALLTKKGNRQQTRTLELPADSTFAVAMMNQRQAAKEEQQRIKNLV
LNLEARENEEYDGEENLSPYGPGSNIYRTSAGHDKPTSHHHHNRADNRPSKERGQRVRKL
QLSDVDWT
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcgcaagaaggcatgagctgcgcgacttgaaccggagggcctgggatggggag
aaggacctctttcccgtggccagctcgctcgactcgaccatgaagaagaacacggccttc
atcaaacgtctgcgcaccgccatctctcccgcgaacctgcccaccttcttgcaggagatc
aagaccgttagcctgtccaagtatctctccgagatcgtatccgcttgccatgaaggcctg
tcgaaactcaagtcccccggggaaatcgaggccggtgtggagatcgtcagcgccctgcac
cagcggttcggccccgccgagtttacctcgtacctcggctggtacctcggcaggtcgctg
gccacgcctgacaagagtgttctcaaagctctctcgccagaagcaagagaaaaggaggag
aaggatcgcctggtccgtcaacgggtcctcctgcgtgttgtgaccgagttgtggctcgtc
gaagtcctgcgcaccctggacgatgtcaaacggcccgacgacgccacgaacggtaccacg
gggaagccgaccgaggtgaagtcccgggcatctgccaaagggggcgctgccgagcctttc
cccctcgaagttctgaaagacctcctcggccacgacagggaacatgtgaacctgccgctg
cttgttgccttcgtcaaggcctttagctgggacgttctgggcgtcaaggccgccggatcc
gagggccgcaaaactgtcgaggaggatggcgcgacgaggactgaggaagggaccgaagat
caagagggtgagcctgcccccgattccgacggcccggccttcactccgcccgagctgcag
gagcgcttcaggaacgtgttgaaacgctactttgaggacctcaagggccacctcgtccgg
gaccagaaggccatctacacccagtctcgcaagaacgccgaagcctacgtcaagtcgggc
gaagtgttcgaggaccgccaagccaacttcgagaagcaggtcaaggcccaggagcgtctg
gtcgccaacgcccaagtgattgccgacgtcattggggccgaaatgcccgacttgaaggac
cacgacgacccttcatccggcgcaagcggcaccattggcattgtcaaggctggggagtat
ctgcgtggccaaggagatggcgctggtatttgggaggacgaagaggagcgtcgcttctac
gaaaacctcgtcgacctcaaggggaaggttcccgccatccttcttgaggaggtgaagaaa
aagaagcccgaggcagacgagcaagtcgggaagaagatagacccggccgaacttgccgag
gcacccaaggctcccgatgctgccgccgacgatcagtcggtagccattgcgaacaagacg
attggcgcccaggtcgatgctttgctggctcgacttccggacctcaccaccaaggatgct
atcgaccagatggccatcgacttctgctatctcaactcgaaggcctcgaggaaccggctc
atcaaggcattgacagacgtgcccaagggccgtggcgatctcctgccctgctggtccagg
cttgttgcaacgcttggccagtacatgacggacatccccaaggggctcgtcgagtatctt
gatgcagagttccgaagcctgcagcggcgtaaggacaaggaatttctgggccaggtcagg
ctcagcaatattcgctaccttgctgaattgaccaagtttggcatcgtgcccgagcacgtc
gtcttccactgcctcaaggtcagcctggatgatttctctcgcatgaacatcgaaatcatc
tgcaacctgctcgaaaactgcggccgctaccttctgcggaacccggagacttcgcctcgc
atggccagcttcctcgagactctccagcggaagaagtctgtgcaacacatcggtgcggcc
gagaggatgctcatcgagaacgccgtgtactacgtcgacccgccgcagcgcccggctatc
cagcagaaggagagaacgccaatggaactcttcatccgcaagctcatctactcggatctc
aacaagcagagctataacaaagtcctgaggcagattcgcaggctgcattgggaagagaaa
gaggttgtcgcggtccttcacaaggtcttttccaagcccgggaaggtcaagtatggcaat
atccatctgcttgccatcttgctcagcgccatatacaggtaccatcccgactttgtcatc
ggcgtcgttgacacgttgaccgagtccatcgcttttggcctcgagcaaaacgacttcaag
ttcaaccaacgtcgcttggctgaagtcaagtacctgggggagctctacaactacaggatg
ctggaacacccggtgatttttgacaccatgtacaaaatcatgactttcggccacggtggg
ccgccggtgcctggtcgcatcaatcccttcgatcagcccgatgacttcttccgcatccgc
ctcatctccacccttctagagacatgcggcatgttcttcaacaaaggcgccgcagggaag
aagttggactacttcctctcctttttccaatactacatccacaccaagaatcccctgcca
atggacattgagttcctcgtgcaggatatcttcgccctaaccaggccgcagtggaagctg
gcttcgaatctggaagaagccagcaaggtcttccatctggcgatcattcaggaccagaag
acttcgggactcgacaaggtcgtggagcaagacgatggaacgagtgaagtgtccagcgat
gacgatgtgcctctcgctgagcaggatgatgaggacgacatgggctctgaggaggccgag
gccgaggctgaggatgccgaccagaatccgtcgtaccgcgatagcgactccgaagaagag
gccattgtggtcaccagagaagaagaggagattgaccctgaggatgaagctgagttcgat
cgcgagtatgcgaagatcatggcggaaagcttcgagacacgcaagttccagcccaagcaa
caatttgacatcccgctgcccatccgccccaaaaaccgtgatgctccgagcggctccgaa
cccgccgagaacggtgccggtgcaccggggtccaccatggctttcgctttgttgacgaag
aagggaaaccgccaacagacccggacgcttgaactgcccgcggactcgacctttgccgtg
gccatgatgaaccagcggcaggcggcaaaggaggagcaacagcgcatcaagaacctggtg
ctgaacctcgaagctagggaaaatgaggaatatgacggtgaagaaaacttgagcccctat
ggacctggcagcaatatttatcgtacctcagcaggacacgacaagccgacttcgcatcac
caccacaaccgggccgacaatcggccgagtaaggagcgcggccagcgagtccgcaagctc
cagctcagtgacgtcgactggacttga
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integrated database retrieval system
