Thermothielavioides terrestris: THITE_2116509
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Entry
THITE_2116509 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K24755
WD repeat-containing protein 76
Organism
ttt
Thermothielavioides terrestris
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ttt04121
]
THITE_2116509
03036 Chromosome and associated proteins [BR:
ttt03036
]
THITE_2116509
03400 DNA repair and recombination proteins [BR:
ttt03400
]
THITE_2116509
Ubiquitin system [BR:
ttt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
THITE_2116509
Chromosome and associated proteins [BR:
ttt03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
THITE_2116509
DNA repair and recombination proteins [BR:
ttt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
THITE_2116509
DSBR (double strand breaks repair)
Other DSBR factors
Others
THITE_2116509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
WD40_WDHD1_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_EML_2
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
11519886
NCBI-ProteinID:
XP_003653971
JGI:
Thite2_2116509
UniProt:
G2R6F0
LinkDB
All DBs
Position
3:join(885558..886101,886155..887185)
Genome browser
AA seq
524 aa
AA seq
DB search
MAPAAKEEPAAMSAFERKRLENIANNNAILSEISTTAAKIIPKPAPPKPKRPSAPRVKRE
PVQREPLRPTRQSSRLAGLGADADVLKRKAEVEAEVEAEKAKAKKMRISGDLNLGDIQVE
GRKWEAGLDGLAGLKGLPVRGAQPGVRTFTDEDVKSTTDKGLKDLRLRMSGLKLYEKWPV
QDIKIVPQRIYSMGFHPTEAKPIVFAGDKEGAMGVFDASQEPSKVEDDEDEEAELPDPVI
SAFKTHSRTISSFHFSPVDANAVFSASYDSSIRKLDLDKGISTQVFAPADPDEDLPISAI
DMATSEPNIIIFSTLQGSLGRHDLRTKPSTAELWSLTDQKIGGFSLHPLHPHLVATASLD
RTLKIWDLRKIQGKGSARAPALLGSHESRLSVSHASWSSAGHVATSSYDDRIKIYSFPDA
GTWSAGAELSESQMAPTREIPHNNQTGRWVTILKPQWQRSPRDGLQKFVIGNMNRFVDVF
AADGEQLAQLDGEGITAVPAVAHFHPTMDWVAGGNASGKLCLWM
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgcggcgaaggaggaaccggcggccatgagcgcgttcgagcgcaagcgcctc
gagaatatcgcgaacaacaacgccatcctgagtgaaatcagcacgaccgcggccaagatc
atcccgaaaccggcgcctcccaagccaaagcgcccgagcgcgccgcgcgtaaaacgggag
cctgtccagcgtgaaccgctccgtccgacgcgacaaagcagtcgactggcgggactcggt
gccgatgctgatgttctcaagcgcaaggccgaggtggaggccgaggtcgaagcagagaag
gccaaggcgaagaagatgcgtatcagcggagacctaaatctcggcgatatccaggttgag
ggccgcaagtgggaagcgggactcgacgggttggcggggctgaaggggctcccggtccga
ggcgcacaacccggggttcggacatttacggatgaagatgtgaagagtacaacggataag
ggccttaaggacctgaggttgcgcatgagcgggctgaagctttacgaaaaatggccggtg
caggatatcaaaattgtgccgcaacggatatactcgatgggcttccatccaacagaagct
aagccgatcgtattcgcgggcgacaaggagggtgcaatgggcgtgttcgacgcatcacaa
gagccctccaaagtcgaggacgacgaggacgaggaggcggagctgccagaccccgtaata
tcagctttcaagacgcattcgaggaccatctcatcctttcacttctctccggtcgacgca
aacgccgtcttttctgcctcgtatgactcatcaatccgcaagctggatctcgacaagggc
atctccacccaggtcttcgcgcctgcggacccggacgaggacctacccatcagcgcgatc
gacatggcgacatctgaacccaacatcatcatcttctccacgctccaaggctcgctcgga
cggcacgacctgcgcaccaagccctcgacagccgagctctggagcctcaccgaccagaag
atcggcggtttctcgctgcacccgctccatccgcacctcgtcgcgaccgcctcgctggac
cggacgctcaagatctgggacctgcgcaagatccagggcaagggcagcgcccgcgcgccc
gcgctgctcggctcgcacgaatcccgcctgtcggtctcgcacgcgagctggagcagcgcc
ggccacgtcgcgacgtccagctacgacgaccgcatcaagatctactcgttcccagacgcg
ggcacgtggagcgccggcgccgagctgtcggagtcgcagatggcgcccacgcgggagatc
ccgcacaacaaccagaccgggcgctgggtcaccatcctcaagccgcagtggcagcgcagc
ccgcgggacgggctgcagaagtttgtgatcgggaacatgaaccggtttgtcgatgtattt
gcggcggatggcgagcagctggcgcagctggacggcgagggcatcacggcggtgccggcg
gtcgcgcacttccacccgaccatggactgggtggcgggcggtaacgcgagcgggaaactg
tgtctatggatgtga
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