Thermothielavioides terrestris: THITE_2117214
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Entry
THITE_2117214 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
THITE_2117214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttt03021
]
THITE_2117214
03036 Chromosome and associated proteins [BR:
ttt03036
]
THITE_2117214
Transcription machinery [BR:
ttt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
THITE_2117214
Coactivators
SAGA/TFTC/STAGA complex
THITE_2117214
Chromosome and associated proteins [BR:
ttt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
THITE_2117214
STAGA complex
THITE_2117214
TFTC complex
THITE_2117214
SAGA complex
THITE_2117214
SLIK complex
THITE_2117214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
VPS13_N
TERB2
DUF4471
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
11516270
NCBI-ProteinID:
XP_003654313
JGI:
Thite2_2117214
UniProt:
G2R7R8
LinkDB
All DBs
Position
3:join(2543006..2544751,2544838..2545095)
Genome browser
AA seq
667 aa
AA seq
DB search
MMRNITFLAEDEKLKYEKGLAALWKVHDTAAPGSPEQNEAKRKIGEFGKILLAKLHQRRQ
QLQQQQQQQQQQQQQQQQQNQQQQQNQQQQSPQQPGQGPSAPLAQQPPVATGPSGNMSNA
PPQASAPGAQAAPNPGPAAGQARQLPAHIISHVNEMQFQAPPGVADKAKWIEEVRQKYAK
ALYSMDNARNMIKSIDQTLQENQSLAPEERKKLEDRKAQLQKQHTDAITFANSVRKQYAV
GGGNQRPGQNGGAATANAGNQAQARPQTAGAQGGNSSGAPAAAPANSLQNSSAAVNAAIE
AAKQQQVLAAARVPGAANSLSAQQGAHAQAPATPAQALQSPVTQAPPAQPAGPQSQPQQS
QPAAQQPAPVKIEPGTQPLPAPLNTAIATAAAGGMPSAGTPTQQNSARLQTPQSATPTGL
NANIRPLTHAAAVNLASQPRPGAIPAAPTAGPGNSVLGAVGPAQQQQGHPHAHPPQQPQP
TAHNLQSKLPIPKVLHEKATQMPTPAPNIGGIGPGRPTYSGGGGIGGGVMNQPALPKLPA
YQLEGEGERILNKKKLDELVRQVCGGTAEGQEGNLLTPEVEESVLNMADSFVDSVLHQAC
RNAKERGSKVLEIRDIQLVLERTYNIRIPGYSSEELRTVRKVQPNSSWIKKMSAVQAAKV
VPGKGDN
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgaaacatcacgttccttgccgaagacgagaaactgaagtacgaaaaggggctc
gccgcgctgtggaaggtgcacgatactgccgcgcctgggtcccctgaacagaacgaggcg
aagagaaagatcggcgagtttggcaagatactgctggccaagcttcatcagcgtcgccag
caactgcagcagcagcagcagcagcagcaacagcagcaacagcagcaacagcagcagaac
cagcagcagcagcagaaccaacagcagcagtctcctcagcaacccggacaaggtccctct
gcgcctctcgcccaacaacccccagtggccacgggcccatccgggaacatgtcgaacgct
cctccgcaagcgtccgcaccgggggcgcaggccgcgccgaaccctggtcccgccgctggc
caggcgagacagttgcctgcccacatcatcagccacgtgaacgagatgcagttccaggcg
ccgcccggcgtagccgacaaggcgaaatggatcgaggaagtccggcagaagtatgctaag
gccttgtattcgatggacaacgctcgaaacatgatcaagtcgatcgaccagacgttgcag
gagaatcagtcgctggccccggaggagaggaagaagctggaggacaggaaggcgcagttg
cagaaacaacacacggacgccatcacctttgcgaacagcgtcaggaagcagtatgctgtt
ggcggcggcaaccagaggcctggccagaacgggggtgcggctactgccaatgcgggcaac
caggcgcaggcccgtccgcagaccgccggcgcgcagggcggaaacagcagtggagcgccg
gccgccgctcctgcgaattcgctgcagaactcctcggccgccgtcaatgccgccatcgag
gctgccaaacaacaacaggtgctggcagccgcccgcgttcctggtgcggcgaattccctt
tcagcgcaacaaggagcgcatgcgcaggctcccgcaacgccagcacaagcgctacagtcg
cccgtcacgcaagcacctccggcgcaacctgccggcccgcagtctcagccccagcaatcg
cagcctgctgcgcaacagcccgcgcccgttaagatcgagcccggcacgcaacctctacct
gcgcctctgaatacggctatcgcgacggctgccgccggtggaatgccctcggcaggcacg
ccgacccagcagaactcagcacgccttcagacgccgcagtcggccactccgaccggtctc
aacgcgaacatccgccccctcacccacgccgcggccgtcaacctggcatcgcagccccgg
ccaggcgcaattcctgccgcgcccactgctggccccggaaacagtgttctaggcgccgtc
ggcccagcgcagcagcagcagggacaccctcacgcgcacccgccgcaacagccgcagcca
accgcgcacaacctgcagtcgaagctgccaattccgaaggtactccacgagaaggctacc
caaatgcccaccccggctccgaacattggcgggattggccccggccgcccgacctacagc
ggtggcggcggcattggcggcggtgttatgaaccagcccgccttgcccaagcttcccgcg
taccagctcgagggcgagggcgagcgcatcctcaacaagaagaagctggatgagctggtc
cgccaggtgtgcggcggaacggccgaaggccaagagggcaatctgttgactcccgaagtg
gaagagtccgtccttaacatggccgactcgtttgtcgacagcgtgcttcaccaggcctgc
cgcaacgccaaggagcgcggctcgaaggtcctggagatccgcgacatccagctcgtcctg
gagcgcacgtacaacatccgcatccccggctactcgagcgaggagctgcggaccgtgcgc
aaggtccagccgaacagctcgtggatcaagaagatgagcgccgtccaggccgccaaggtc
gtccccggcaagggagataactga
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