Thermothielavioides terrestris: THITE_2117327
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Entry
THITE_2117327 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
THITE_2117327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2117327
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
THITE_2117327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
UTP6_C
TPR_16
HAT
TPR_19
HAT_Syf1_CNRKL1_C
TPR_6
Motif
Other DBs
NCBI-GeneID:
11516247
NCBI-ProteinID:
XP_003654365
JGI:
Thite2_2117327
UniProt:
G2R7X0
LinkDB
All DBs
Position
3:complement(join(2760400..2761493,2761548..2763024,2763098..2763787))
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AA seq
1086 aa
AA seq
DB search
MAEYDSTYQGDAWGDNGGYEETIGGEQEHIQQHSTHQDQAEYSVDPSQRHAPGDLPSPDG
DTDDGGEYDPESVTTASAAGAALQPAADHMPLRTSPQRAAKKKPRTAGGFLVGDSDSEDD
EAPVPASHSAVLRSPLQHPITAKQSAVAPSSADPASRENAPAAAPAGRREDAPPAQARVD
KVAQLEARIRDDPRGAMDAWLALIAEHRAKNDIEQARQTYERFLAVFPQAADVWVDYLAM
ELDMNNFPEAELIFNKSLMSTLNVNLWTKYLDYIRRRNDLNDSTGNARQTVSRAYEFVID
NIGLDKDSGKIWAEYIQFIKFGPGTVGGSQWQDQQKMDQLRKAYQRAICVPIANVNTLWK
EYDQFEMGLNKLTGRKYLAEKSASYMSAKSAYTALENITRGLQRTTLPRLPPAPGFDGDQ
EYMEQVELWKKWIDWEKSDPLDLKDDKDQPGMYQKRVVYVYNQALMALRFWPEMWVDAAQ
WCFDNNIRAKDGGSAGLDFLLRGIEANPESVLLALKHADYIESTYPIEENDESKIARGKA
VRAPYDKVLDTLYGIVKGLKERETAELARIEEAAKSSGETPTNKSEEEDEDEDEAGSSDK
RGKETRTNDQIRAIKQGYAAQTQLLSRTISFVWIALIRAMRRIQGKGKPNTEMGGMRQAF
QDARHRGRLTSDVYSAVAQLEWTIYKDPAGGKIFDRGAKLFPEDENFTLENIKYLHSRDD
YTNARVLFETVVNRLTQKPELVHKAKPLYAYFHKYESQFGELAQIAKLEKRMAELFPEDP
KLAQFSARYSSDKFDPIAARIIVSPATQLRPKVLVPSIEQGTSLQNSPRPPPFASRVSPA
PQFQPATNSPKRPLPADDFDEPPRKIQRNELGEFQRGASPLKGAAGRRLDQQRRLQGQSA
ASYTAAPAPIARDITFLLSQIPRAEFYDFHRFNPARMTNLLRDTPIPDYQVWKNTRPGPD
YPGQYGGYQSRDSPAPAGRPLSPYLGGGRAPPTSGAPYRQSPMRPGSSGSYEPPPAVYAP
PPQAAYGHPPPVQYEGGAGAAWPPYPPPPVAQQGYGAPPPPQLGYGQAPPPPPAQGGYPR
YPPAPY
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatacgactccacttaccagggcgacgcttggggtgacaatggggggtatgag
gagacaattggcggcgaacaagagcatattcagcagcatagcacccatcaagatcaagca
gagtattccgttgatccaagccaacgacatgctccaggtgacctgccatctcctgatggt
gacaccgatgacgggggcgagtacgatcctgaatcggtcaccactgcgtcagccgctggt
gccgcgctccagccagctgcggaccacatgcccctcagaacttcaccccagcgggctgct
aagaagaagccacgcacggcaggaggcttcctagtgggagactccgactctgaagatgac
gaggcgcctgtgcctgcatcgcactctgctgtcctgcgctcccctctccaacaccccatt
actgccaaacagtctgctgtcgccccttccagtgcggatcctgcttcccgcgagaatgcc
ccggcggctgctcctgccggccggcgggaggatgcccccccagcgcaagctcgggttgac
aaggtcgcgcagctagaggcccgcattcgcgatgatccccgaggcgccatggatgcgtgg
ttggcgctgatcgcagagcaccgcgccaagaacgacatcgaacaagcgaggcagacctat
gagcgctttcttgccgtcttccctcaagctgccgacgtctgggtcgattacctcgccatg
gagttggacatgaacaacttcccagaagccgagctcatcttcaacaagtctctcatgtca
acactcaatgtgaacttgtggaccaagtacctcgactacatccgtcggaggaacgacctg
aacgatagcaccggaaacgctcgccagaccgtctcccgcgcctacgagtttgtgattgac
aatattggcttggataaagactctggcaagatctgggctgagtacatccagttcatcaag
ttcggcccgggaaccgtcggcggaagccaatggcaggaccaacagaagatggatcagctt
cgcaaggcgtaccagcgagcgatttgtgtgcccatcgcgaacgtcaataccctgtggaag
gagtacgaccagtttgagatgggtcttaacaagttgaccggccgtaagtacctggcggaa
aagtctgcgtcatacatgtcggcgaagagcgcctacacggccctcgaaaacatcacacgg
gggcttcagcggacgactctcccacgtctcccgccggcgcctggctttgacggtgaccag
gagtacatggagcaagtggagctttggaagaaatggatcgactgggaaaagtcggacccc
cttgacctcaaggacgacaaagaccagcctggcatgtaccagaagcgcgttgtctatgtc
tataaccaagcgctcatggccttgcggttttggcccgagatgtgggtcgatgctgcgcag
tggtgcttcgacaacaacatcagagccaaggatggcggctcggccggccttgatttcctc
ctcaggggtattgaagcaaatcctgagagcgtcttgctcgctctaaagcacgccgactac
atcgagtccacctatccgattgaggagaatgacgaatcaaaaattgcccgtgggaaggcg
gtgcgtgcgccctatgacaaagtcctggacacgctctacggcatcgtcaagggcctcaaa
gagcgggaaaccgccgagctcgcgcggatcgaggaggctgcgaagtcatctggcgagacc
cccaccaacaagtctgaagaggaggatgaggatgaagacgaagcgggctcctcagacaag
aggggcaaggagaccaggacgaacgaccagatccgggccatcaaacaaggctatgccgcc
cagactcagctgctttcgcggaccatctcgttcgtctggattgccttaatccgggcgatg
cgccgtatccaaggcaagggcaaacccaacaccgagatgggtggcatgcggcaagccttc
caagatgcccgccaccggggccgactcaccagcgatgtttactctgctgtcgcccagcta
gagtggaccatctataaggacccggccggcggcaagatctttgatcgtggtgcgaagctg
ttccccgaggacgagaatttcactttggagaacatcaagtatctccattcccgtgatgac
tacacaaatgctcgcgtcctcttcgagacagttgtcaaccgcttgacgcaaaaacctgag
cttgtgcacaaagccaagcctctctatgcctactttcataagtacgagtcgcagttcggc
gagctggcccagatcgccaagttggaaaagcgcatggcggagctcttccccgaggatccg
aagcttgctcagttcagcgcgcggtattcgagcgacaagttcgaccccatcgcagcgcgc
atcattgtctcgcccgcgacccaacttaggccaaaagtcctggtgccctccatcgagcaa
ggcacctccctccaaaactcgcctcgcccgcctcccttcgcttcccgcgtcagtcccgcg
cctcagttccagccggccacgaactctcctaagcgaccattgcccgcagatgacttcgac
gagccaccacgcaagatccagcgcaatgaattaggggagttccagcgaggcgcttcgccg
ctcaagggcgccgcaggccgccggctggaccagcagcgccggttgcagggccagagcgca
gcctcgtataccgctgcaccggctccgatagcgcgggatatcaccttcctcctcagccaa
atccctcgggccgagttctacgacttccaccgcttcaaccccgccaggatgacaaacctg
ctgcgcgacacgccgattcccgactatcaggtgtggaagaatacccgcccaggcccggac
tatcccggccagtacggcggctatcagagccgcgactccccggcacccgccggccggccg
ctgagcccttacctcggaggcggccgcgcgccgcccacctccggcgctccatacaggcag
tcccccatgcggccgggctccagcggatcatacgagcccccgccggccgtatacgcgccg
cctccccaggcagcctacggccacccgccacccgtgcagtatgaaggcggcgcgggcgcc
gcgtggccgccctatccgcctccacctgtggctcagcagggatacggggctccgccgccg
ccgcagttgggctatggccaggcgccgccaccaccgccggcgcagggtggctatccccgg
tatccgccggccccttactag
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