Thermothielavioides terrestris: THITE_2117497
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Entry
THITE_2117497 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
THITE_2117497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttt03400
]
THITE_2117497
DNA repair and recombination proteins [BR:
ttt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
THITE_2117497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_23
AAA_29
AAA_27
AAA_21
DNA_pol_alpha_N
Motif
Other DBs
NCBI-GeneID:
11516151
NCBI-ProteinID:
XP_003654451
JGI:
Thite2_2117497
UniProt:
G2R856
LinkDB
All DBs
Position
3:join(3032767..3033210,3033268..3033436,3033501..3035893,3035956..3036645)
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AA seq
1231 aa
AA seq
DB search
MGENSATAIRTPAKTPSTAKKAPSTGKQQSILGFFSRTGAASSVAGATPSPSARSASTTT
TKRDASPQCLKETTTKSNSMLVSRRTATATPVPSSDALEPSSSQENRDASTTKVASLTRL
SPAATPAKIVKKQPVSAKPSLHSSPSRKAKKVVNYAESSDEDDDAIFAALKPRRSRQRRS
RAAVSDEEDEDTYQDEADNAEDDDDFVVSDDSDAPSKSKKRKRPPSRPTAPRKKSNLSSS
PGPDLPVPADDDEIMEDIPPSTSTAQKWKYDPDNVHPSGPTSRVPPPAQKSTGPKPKPKP
HSKEPEERYPWLANILDGNKNPPGHPDFDPTSIYIPPSAERGFSAFEKQYWDIKKNLWDT
IVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGFKVAR
VDQMESALGKEMRERESNDKKAEKIIRRELTCILTGGTLVDGAMLQDDMATYCAAIKESV
VDEKPAFGIAFVDAATGQFFLSEFEDDVDLTKFETFVAQTSPRELVLEKSRLSSKALRIL
KNNTGPTTIWNYLKPGTEFWDADLARRELDCSGYFTSEEGQEVVWPKKLGEAREKDLAMS
ALGGLTHYLRILKLDQSLLSQGNFESYNPIHRNGTLILDGQSLINLEVFANTVNGGPEGT
LFSLLNRCITPFGKRLFRQWVCHPLCNIQKINERLDAVDMLIADRSILQQFSSQMAKMPD
LERLISRIHAGACRPEDFVRVLEGFEQIDYTMALLGAFGGGNGLVDRLIASMPNLKEPLG
YWETAFDRRKARDSKLLIPERGVEEDFDRSQDELARIKDELHALLERQKTALKCKTLKFT
DVGKEIYQIEVPKSVKVPASWRQMSATSAVKRYYFRELEDLVRELQEAEETHSQIVKEVA
SRFFRRFDMDYEVWLQAIRIIAQLDCLISLAKSSSALGMPSCRPVFVDDERSVVEFKELR
HPCMANTVADFIPNDIKLGGDEAKINLLTGANAAGKSTILRMSCIAVIMAQIGCHVPAAS
ARLTPIDRIMSRLGANDNIFAAQSTFFVELSETKKILAEATPRSLVILDELGRGTSSYDG
VAVAQAVLHHVASHIGCVGFFATHYHSLAAEFAHHPEVRARRMQIRVDERERRVTFLYRL
EDGVAEGSFGMHCAAMCGIPRRVIDRAEVAAREWEHTSRLKESLERAKMGCYLPLGVLSD
VASLLRGGDGREGGEVGERGVEVLLRAIEAL
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggagagaactcggccaccgcgatccgcactcctgcgaaaacgccgtccacggcaaag
aaggcgccctcgaccggcaagcagcagagcatcctcggcttcttctctaggacaggtgca
gctagctctgtcgcaggagcaactccatcgccatctgccaggtctgcatccacgaccacc
accaagagggacgcgtcgccgcaatgcttgaaagagacgacgaccaagtccaactcgatg
ctcgtgtcgaggcgcaccgccaccgccacgcccgtccccagcagcgacgcgcttgaaccc
tcaagctcccaggaaaacagagacgcgagcaccaccaaggtggctagccttacccgtctc
tctcccgccgctactcctgctaagatcgtgaagaaacagcccgtcagcgcaaagcccagc
cttcacagcagtccatctcggaaagccaaaaaggtcgttaactacgccgagtcctctgac
gaagatgacgacgccatttttgctgcgctgaagcccaggagatcccgacaacgccgttcg
cgtgccgcagtctcagacgaggaggacgaggacacataccaggatgaggccgacaacgct
gaagacgatgacgattttgtggtctctgacgattccgatgcgccctccaagtcgaagaag
aggaagcgcccgccgtccaggcctacagccccacgcaagaagtccaacctttcgtcctct
cccggccccgatttacccgttccagcggacgacgatgaaatcatggaggacatcccaccg
tcgacgtccactgcccagaaatggaagtatgacccagacaatgtgcatcccagcggccct
acatcacgcgttcctcctcccgcacagaagtccactggcccgaaaccgaaacccaagcca
cacagtaaggagccggaagaacggtacccctggctggccaacatcctagacggcaacaag
aaccctcctggccacccggactttgacccaacgtcaatctacattcctccatcagccgaa
aggggcttttcggcattcgagaagcagtactgggacatcaagaagaacctctgggataca
atcgtcttcttcaagaagggcaagttctatgagctctacgagaacgacgccaccatcgga
caccagctgtttgacctgaagcttaccgaccgcgtcaacatgcgcatggttggcgtcccc
gagagctctctggacatgtgggtgaaccagttcgtcgccaaaggcttcaaggtcgcgcgt
gtcgatcagatggagtctgccctaggcaaggagatgcgcgaacgcgagagcaacgacaag
aaggccgagaagattatccgaagagagcttacatgcatcctgaccggcggcacgcttgtg
gacggcgccatgctgcaggatgacatggccacgtactgcgcggccatcaaagagtccgtg
gtagatgagaagcctgctttcggcattgcctttgttgatgctgccactggccagtttttc
ctttccgagtttgaggacgatgtggacctaacaaagttcgaaaccttcgtcgctcagaca
tctccacgggaactggttttggagaagtcccgcttatcatcgaaggctttgcgcatcctg
aaaaacaacaccggaccaaccaccatctggaactacctgaagcccggaacggagttctgg
gacgctgatcttgcgaggcgcgagctggattgcagcggctatttcacatcggaggaaggc
caggaggtcgtttggccgaagaagctcggtgaggcgagggagaaagacctggccatgtcg
gccctcgggggcctgactcactacctccgaatcctgaagctcgaccagagcctgttgtct
caagggaacttcgaatcgtacaaccccattcaccgcaacgggactcttatcctggacggc
caaagcctcatcaatctggaggttttcgccaacacagtcaacggcggccccgaaggcact
ttgttcagtctcctcaacaggtgcatcactccgttcggaaagcgccttttccgccagtgg
gtgtgccatccgctgtgcaacatccagaagatcaacgagaggctcgacgccgtcgacatg
ttgatcgcagaccgcagcatcctgcagcagttttcgtcccagatggccaagatgcccgac
ctggagaggctcatctcgcgcatccatgccggtgcctgcaggcccgaagactttgtccga
gtcttggaagggttcgagcagatcgattacaccatggcgctcctcggtgcgtttggcggc
ggcaacggcctcgtcgataggctcatcgcgtccatgcctaatctgaaggagccgttgggt
tactgggagaccgccttcgacaggaggaaggctcgggacagcaagctgctcatcccggag
agaggcgtcgaggaagactttgacagaagccaagacgagctggcgcgtatcaaggacgaa
ctccacgcgctactagagcggcaaaagaccgccctaaagtgcaagacgttgaagttcacg
gacgtcggcaaagagatctaccagattgaggtacccaaatccgtcaaagtgcctgcgagc
tggcgtcaaatgtctgccacctccgccgtcaagcgatattacttcagagagctggaggat
ctcgtccgggagctccaggaggccgaggagacgcactcgcagatcgtgaaggaggtcgct
tcccggttcttcaggcggtttgacatggactacgaagtctggctgcaggctatccgcatc
atcgctcagctggactgtctgatcagcttagccaagtcctcgtccgcactcggcatgccc
agctgccgcccggtgttcgtggacgacgaacggagcgtggtggagttcaaggagctccgc
cacccctgcatggcaaacaccgtggccgactttatccccaacgacatcaagctcggcggc
gacgaggccaagatcaacctgctgacgggcgccaacgcagccggcaagtctaccatcctc
cgcatgtcctgcatcgccgtcatcatggcccaaatcggctgccacgtgccggccgcatcg
gcgcggctcaccccgatcgaccgcatcatgtcgcgcctgggcgccaacgacaacatcttc
gcggcgcagagcaccttcttcgtcgagctgtccgagacgaagaagatcctggccgaggcg
acgccgcgctcgctcgtcatcctggacgagctcggccggggcacgtcgtcgtacgacggc
gtggccgtggcccaggccgtcctgcaccacgtcgcctcgcacatcggctgcgtcggcttc
ttcgccacgcactaccacagcctggccgccgagttcgcgcaccacccggaggtgcgcgcg
cgccgcatgcagatccgcgtcgacgagcgcgagcgccgcgtcaccttcctctaccgcctc
gaggacggcgtcgccgagggctccttcggcatgcactgcgccgccatgtgcggcatcccc
cgcagggtcatcgaccgcgccgaggtcgccgcccgcgagtgggagcacaccagccgcctc
aaggagagcctcgagagggccaagatgggctgctatctcccgctgggcgtgcttagtgat
gtcgcgagtttgctgaggggcggggacgggagagagggtggtgaggttggggagcgcggg
gtggaggttttgctgcgcgctatcgaggcgctttga
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