Thermothielavioides terrestris: THITE_2117979
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Entry
THITE_2117979 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K18716
nucleoporin NUP42
Organism
ttt
Thermothielavioides terrestris
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2117979
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
THITE_2117979
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Nucleoporin_FG
zf-CCCH_2
Torus
Motif
Other DBs
NCBI-GeneID:
11518336
NCBI-ProteinID:
XP_003654777
JGI:
Thite2_2117979
UniProt:
G2R6A8
LinkDB
All DBs
Position
3:join(4300772..4300817,4300994..4301098,4301156..4301358,4301412..4302659)
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AA seq
533 aa
AA seq
DB search
MTVCRFYQQGYCRYGNACKFEHPPKGGQQNYNRFGVFGGQTGPATSGRAADSPPYPGLTA
DAIQRDLTSELPQWILSCYGPGRDAPEQLWGGYPREQSFEEIRLHYMMGAMAGNPNGALN
DIQTLYQNAMDQIQHTVNNIPAAIQFILDAEKRHPNRIDVCKGSTGQAAAGGAFGTTANA
FQPAAPPRNPFGAPATPTSSVGSAFGQPSALGQKPSPFGAPATGFGQAAQPAFGQPSTLG
GTPAFGQTSALGVKPNPFGAPALTQPTQPAGGSGFGQPAFGQPATLGAKPNPFGAPASGG
GSFGVTQPVPPNNPFGQPAQPQAQNAPSLFGQPATAQPANNPFGQPSTTSPFGQPAPAAA
KPFGQPQQAPATQPFGGPATTAAAPPALNAFAQPAPTTTTSTATAAASAAASAGQAANPY
GPGATRQHPDPSTYSTRDADGRLRTFKGRPVTYETPRNGGKPVPVLRNFDGSAVRIWMPN
GPPPYTADSEAEPAQYEDEAVKEQWRYFVETGRFKDGVMPEVPPKREFCLWDF
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgacggtttgccgattctaccagcaaggctactgccgatacggaaatgcctgcaagttc
gaacaccctcccaaaggagggcagcaaaactacaatcgcttcggcgtcttcggtgggcaa
accggtccagccacgagcgggcgagcagcagactcgccgccataccccggtctgaccgcc
gacgctatccagcgagatctaacgagcgagctgccacaatggattctgtcgtgctacggc
ccgggaagggatgcgcccgagcagctctgggggggctatccgcgcgagcaaagttttgag
gagataaggctgcattacatgatgggggccatggctgggaaccccaacggggccctcaac
gacatccagacgctgtaccagaacgctatggaccagatccagcacaccgtcaacaacatc
ccagcggcgatacagttcattctggacgcggaaaagagacatccgaaccgcatcgacgtg
tgtaagggctcaaccgggcaggccgctgctggcggcgcgtttggaaccacggcgaatgct
ttccaaccggcggctcccccgagaaatccgtttggcgcacccgccacccccacatcctcg
gtcggcagcgcctttggacagccctcggctttgggtcagaagcccagtccgtttggcgcg
ccggcgactggcttcggtcaagccgctcagccggctttcgggcagccgtcgacattagga
gggacgccagcttttgggcaaacaagcgcattaggggtgaagcccaatccatttggggcg
ccagccctgactcagccgacacaaccggcgggcggatcgggatttggccagccggcattc
gggcagccggcaactttgggggcaaagccaaacccatttggagctccagctagcggagga
ggctcgtttggtgtgacgcaaccagtcccgccgaacaatcccttcggccagccagcgcag
ccgcaggcgcaaaacgctccctccctgttcggccagccagccactgctcaacctgcgaac
aacccattcggccagccgtcgacaacaagtccctttggccaaccagcaccagccgcagcg
aagccctttggccagccgcaacaggcgccagcaacccagcccttcggcggccccgcgacg
accgccgccgccccccccgcgctcaacgccttcgcgcaaccagcaccaacaacaacaacc
tccaccgccaccgccgctgcatccgcagccgccagcgccggccaggccgccaacccctac
ggccccggcgccacgcgccagcacccggacccgtcgacctacagcacccgcgacgccgac
ggccggctgcgcacgttcaagggccggccggtgacgtacgagacgccgcgcaacggcggc
aagccggtgcccgtgctgcgcaacttcgacggcagcgccgtgcgcatctggatgcccaac
ggcccgccgccgtacacggccgactccgaggccgagccggcccagtacgaggacgaggcc
gtcaaggagcagtggcggtactttgtggagacgggccggttcaaggacggcgtcatgcct
gaggtgccgcctaagagggagttttgtttgtgggatttttag
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