Thermothielavioides terrestris: THITE_2118331
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Entry
THITE_2118331 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K10259
F-box and WD-40 domain protein MET30
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt04111
Cell cycle - yeast
ttt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
THITE_2118331
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
THITE_2118331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ttt04121
]
THITE_2118331
Ubiquitin system [BR:
ttt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
THITE_2118331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
F-box-like
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_EML
F-box
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_Vps41
F-box_4
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
WDR54
Motif
Other DBs
NCBI-GeneID:
11520411
NCBI-ProteinID:
XP_003655065
JGI:
Thite2_2118331
UniProt:
G2R9P1
LinkDB
All DBs
Position
4:complement(join(<576512..576517,577067..577412,577471..577575,577642..577771,577830..578402,578489..578962))
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AA seq
544 aa
AA seq
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MERFQSPTIRRGRPPLPRQDGIDCPTDDADTASLTHPPTPRHKSVPSLDRSGETEVGQVD
TARSCDRLRPEEERLRSRDSMTSMSSSLIGKTVTPFLKEHIPSLYAPIGKPNNEQTAREK
DPNTKYCYRHRPDSKCRRAADEAKMVKIQQELDKLTPADQQAITHVWSLFSAAPARHREL
MLQGVLAQLCFPQLSLVSREVNEALKIDFITALPVEIAQKILCYLDTVSLTKAAQVSQRW
RMLADDDAVWVRMCEQHVNRKCTKCGWGLPLLERKRLRNYTRARQLAKESSNGRVQELTD
SSSQGTLALGKRQGESTEGPDGKRQCVEKQPELEPRTRSWKAVYKDRWEVGYNWKYGRCS
VKTLKGHTNGVTCLQLDDNILATGSYDATIKIWNIDTGEEIRTLRGHTRGIRALQFDESK
LISGSLDSTIKIWNWHTGECISTLQGHTDGVVSVHFDAQLLASGSIDRSVKIFDFNSKEA
FCLKGHTDWVNCTRLDIASRTVMSASDDTTIKLWDLDTKKVIRTFEGHVGHVQQVLLLPP
EYDR
NT seq
1634 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcttccaatctcccaccatccgccgtggccgcccgccgctcccgagacaggat
ggcatcgattgcccgaccgatgacgccgacacggcttctctgacacacccgcccacacct
cgacataagagcgttcccagcctcgacagatccggcgagaccgaggtcggacaggtggac
acggccagaagctgcgatcgactgcggcccgaggaggagcggttgaggtcccgcgacagc
atgaccagcatgtcgtcgtctctgatagggaagacggtcactccgttcctgaaggaacac
attccaagcttgtacgccccgatcggcaaaccaaacaatgaacagacggcgcgagagaag
gacccgaacaccaagtactgttatcgccaccgccccgattcgaaatgtcgacgagctgcc
gacgaggccaagatggtcaagatccagcaggagctcgacaaactcactcccgctgatcaa
caagccatcacccatgtgtggtcactgttctccgccgcgccggcccgccaccgcgagctg
atgctgcagggggtcctcgcgcagctctgcttcccccaactatcgcttgtctcgcgcgag
gtgaacgaggccctcaagatcgacttcatcacggcgctgcccgtcgagatcgcgcagaag
atcctgtgctacctcgacacggtgagcctgaccaaggctgcgcaagtcagccagaggtgg
cgtatgttggccgacgacgatgccgtctgggtccgcatgtgcgagcagcacgtgaatcgc
aagtgcaccaagtgtggatggggcctgcccctcctggagaggaagaggctgcgcaactac
acgcgggcgcgccaactggccaaggagagctccaacggaagggtccaggaattgaccgat
tcgtcctcccaagggaccctagctttgggcaagcgacagggcgagtctacagaagggcct
gacggcaagcggcaatgcgtggagaagcagccggagctggagcccaggacgcggagttgg
aaggccgtgtacaaggaccggtgggaggttgggtacaactggaagtacgggcgctgctcg
gtcaagacgctgaagggacacaccaacggcgtcacatgtcttcagctagatgacaacatt
cttgcgaccgggtcctacgatgccaccatcaagatttggaacatcgatacgggcgaggag
attcgaaccctccgcggccatacgcgggggatccgcgccttgcagttcgacgaatccaaa
ttgatcagtggcagcctggacagcaccatcaagatctggaactggcataccggcgagtgc
atctcgacgctccagggccacaccgacggcgttgtcagcgtacactttgacgcccagctt
cttgcgagcggctcgatcgacaggagcgtcaagatctttgacttcaactcgaaggaagcg
ttctgcctgaaaggccacaccgactgggtgaactgcacgcgactcgacattgccagcaga
acggtcatgtcggcttctgacgacaccacgatcaagctgtgggacttggacaccaagaag
gtgatccggacgtttgaaggacacgttggccatgtgcagcaagtgctgttgctcccgcca
gagtacgaccgtag
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