Thermothielavioides terrestris: THITE_2118582
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Entry
THITE_2118582 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
THITE_2118582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2118582
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
THITE_2118582
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GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
11524380
NCBI-ProteinID:
XP_003655190
JGI:
Thite2_2118582
UniProt:
G2RAC2
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All DBs
Position
4:join(1106600..1107137,1107204..1107463)
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AA seq
265 aa
AA seq
DB search
MSTITPTALQSSQPPIIPLPFNANQPETIRLYPLSNYTFGVKETQPEEDPSVLARLKRLE
EHYQAHGMRRTCEGILVCHEHNHPHILMLQIANAFFKLPGDYLRPEDEEIEGFKARLDER
LAPVGSLGEGNKAGDWQVGDCLAQWWRPNFETFMYPFVPAHITRPKECKKLYFIQLPETK
VLSVPKNMKLLAVPLFELYENTQRYGPQLSAIPHLLSRYNFEFVDENGQVVAVTPGAGPS
DGYVPKTKVLAGGDDIDMKTENGTH
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccattacgcctaccgcgctgcagagctcgcagccgccgattattcccctgccc
ttcaacgccaaccaacccgagacgatccggctgtacccgctgtccaactacacgttcggc
gtcaaggagacgcagcccgaggaggaccccagcgtgctggctcggctgaagcgcctggaa
gagcattaccaggcacatggcatgcggcgcacctgcgagggcatcctggtctgccacgag
cacaaccacccgcacatcctgatgctgcagatcgccaacgccttcttcaagctgcccggc
gactacctgcggcccgaggacgaggagatcgagggcttcaaggcccgcctggacgagcgg
ctcgcgcccgtcggcagcctcggcgagggcaacaaggctggcgactggcaggtcggcgac
tgcctcgcccagtggtggcgcccgaactttgagactttcatgtacccgttcgtgccggcc
cacatcacacggccgaaggagtgcaagaagctctacttcatccagctaccggaaactaag
gttctgagcgtcccgaagaacatgaagctgcttgcggttcccctctttgagctatacgag
aacacgcagagatacgggccccagctctccgccattccccacctcctcagccgctacaac
ttcgaattcgtcgatgagaatggccaagtggttgctgtgacgcccggcgcagggccgagc
gatggttacgttcccaagaccaaggttttggcagggggcgacgacattgacatgaagacg
gagaacgggacgcactga
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