Thermothielavioides terrestris: THITE_2119958
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Entry
THITE_2119958 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ttt
Thermothielavioides terrestris
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ttt03016
]
THITE_2119958
Enzymes [BR:
ttt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
THITE_2119958
Transfer RNA biogenesis [BR:
ttt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
THITE_2119958
Prokaryotic type
THITE_2119958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
11520012
NCBI-ProteinID:
XP_003655822
JGI:
Thite2_2119958
UniProt:
G2R988
LinkDB
All DBs
Position
4:join(3354402..3354520,3354593..3354683,3354752..3354988,3355046..3357754)
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AA seq
1051 aa
AA seq
DB search
MSQRPGTHVPAVRAEAEKALGITQRSAAINFAWTGDIRKRFTDFLVNEIRKDGTVLHLRD
YPEEDTPRRQPALDRKASTPSSKPENKAKVHHISEEDRKIVVDLLGESAAQRLIELDENV
QAKKPMAAKERTVAFDPVTDRAKRGIIHQEIRRIFQSRIDTAADAAGVISATATKWSNNS
RASNRTSNRGPNRTSDRTSDRTADRTTDRASDDRAASQNWGARRDNSHYRDQARDFSELG
GEYLHFTLYKENKDTMDAVNTIARLLKIKASNFGFAGTKDRRASTVQRISVYRQRISNLV
WLNSRISNVKVGDFEYSPEPLQLGQHGGNEFVITLKNCMPLGGSNCSIVQRMKMIQQAVE
CGLAYLKHHGYINYYGLQRFGTHAIGTHLLGMKILQGDYEGVIDDILHVEEDLIKEVLSN
ATQPSGPGKDSQNSRDEHNRARGITTWKATKNAAQALEFLPKRYSSETAIIRHLGKNPKD
FTGAVLSITRGMRMMYVHAYQSYVWNFVATRRWSKYGAKVIEGDLVLVGGTRRRESQSDD
EFNPYDDNDEDNIYAQAHALTAAEVASGKYTIFDVVLPTPGYDVTYPRNDIGEYYVEFMG
KPENGALNPYEMRRKQREFSLSGNYRPLLGRLIGDPQYAIRAYHDDTQQLYPTDLDYAHH
KKNAEKLAKAAARAEPNAAAAGADSMISRWAHFALNPTAYDDALAAQRRRKADQEPPSPS
VLVTNETWVQTGVNGGAKRVKLARHQQQIETPLDTGVSGDNTSPTVEAPAVEAPAVQVIQ
AEGPEEDAGRPACPVGNGATLTDNPRDTTPPRIITGGPIPMISLPKGAIPTSGIRGVSDA
YYASTGQIPYFGPLPADFKFESSPDGLDAPQGQQRESGTKQFEASGLSQHSDGSVKIAGN
ETNGAAATTEDQQSLLPVLSETTLPEAPVTWTKPKLLSTVDWYGADLPQLPSVSENTTNG
QSDGTSMALVKVEEPDNAPGDTELINNVPVPKLRTASNNPLSSVGNGIDENSIDPEASKI
AVILKFQLKASNYATIVLRELMGTTAEERAL
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagcgcccgggcacccatgtgcccgccgtgcgcgctgaagccgagaaggctctt
ggcatcacgcagcgctcggccgcaatcaattttgcctggactggcgacatccgtaagcgc
ttcacggatttcctggtcaatgagattcggaaggatggcaccgtccttcaccttcgtgat
tacccggaggaggatacacctcggcgccagcccgcgcttgatcgcaaggcctctacccca
tcctcgaagcccgaaaataaggccaaggtccaccatatctcggaagaagaccgcaagatt
gttgttgacttgctcggcgagtctgccgcccagaggctgatcgagctcgacgaaaatgtc
caagccaagaagccgatggctgcgaaggagcggactgttgcgtttgaccctgtcactgat
agagcgaagcgtggtatcatccatcaggaaatccggcgcatcttccaatcccgcattgac
actgccgccgatgcagcgggtgtcatcagcgcgaccgcgacaaagtggtccaataacagc
cgtgcttccaaccgcacttccaaccgcggtcccaaccgcacttcggatcgcacttcggac
cgtactgcagaccgcactaccgaccgcgcttctgacgaccgggctgccagccagaactgg
ggggctcgccgcgacaacagccactaccgcgaccaggctcgcgatttctccgagctcggc
ggtgaatacctccactttaccctttacaaggagaacaaggacacaatggatgcagtcaat
accatcgcccgccttctcaagatcaaggcgtccaacttcggcttcgccggcaccaaggat
cgccgcgccagcactgtccaacgcattagtgtctaccgtcagcggatttccaacctggtc
tggctcaattcgcgtatttccaacgtgaaggtgggcgactttgagtactccccggagcca
ctccagcttggccagcatggaggcaatgagttcgtcattacgctcaagaattgcatgccc
ctgggcggcagcaactgctccattgtccagcgcatgaagatgatccagcaggccgtcgaa
tgcgggcttgcctacctgaagcaccacggttacatcaactactacggcctgcagcgcttc
gggacccacgccattggcactcacctgctcggcatgaagatcctccagggcgattatgag
ggcgtcatcgatgacattctccacgtcgaagaagacctcatcaaggaagtcctgagcaac
gccactcagccctccgggcctggaaaggactcgcagaacagccgggacgaacacaaccgc
gcccgcggcatcaccacgtggaaggcgaccaagaatgccgcccaggctcttgagtttctt
cccaagcggtacagctctgagactgccatcattcgccatctgggtaagaacccgaaggac
tttactggagccgtcctgagcatcacccgtggtatgcgcatgatgtatgtccacgcctat
cagtcatacgtctggaacttcgttgccactcgtcgctggtccaagtacggggccaaggtc
attgagggcgacctggtcttggtcgggggaactcgtcgccgcgagagccagtccgatgac
gagttcaatccgtacgacgacaatgacgaagacaacatctacgcccaagcccatgccctg
acggcagctgaggtcgccagcggcaagtacaccatcttcgacgtcgtcttgcccactccg
ggctacgatgtgacgtaccctcgaaacgacattggcgaatactatgtcgagttcatgggc
aagcccgaaaatggcgccctcaacccctacgagatgcgtcgtaagcagcgcgagttcagc
cttagcggcaactatcgccccctcctagggcgtttgatcggcgatccccaatatgccatc
cgcgcataccatgatgacactcagcagctgtacccaactgatctcgactatgctcatcac
aagaaaaacgctgagaagctggccaaggctgccgctcgtgctgaacccaacgccgctgcc
gccggtgcggactccatgatcagccgctgggcccacttcgccctgaaccctactgcctac
gacgacgctctggctgcccaacgccgtcgcaaggccgaccaagagcctccttcgcctagc
gttcttgttaccaatgagacttgggtccagaccggtgtcaatggcggtgcgaagcgcgtt
aagctcgcgcgtcaccagcagcagattgaaactccgttggataccggtgtctccggtgac
aatacttcccccaccgttgaggctcccgccgttgaggctcccgccgttcaggtcatccaa
gccgaaggccccgaggaagatgcaggccgcccggcttgccctgtcggcaatggtgccacc
ctgacggacaacccgcgagacaccacaccccctcgtatcatcacgggtggtccgatcccc
atgatttctctccccaagggtgccatccccacctccgggatccgtggcgtgtccgacgcc
tactatgcttccactggccaaatcccttacttcgggcctctgccggctgacttcaagttc
gaatcgagcccggatggtctcgatgcgcctcagggccaacaacgtgagtccggcaccaag
caatttgaagcgtcgggcttgagccagcattccgacggctccgttaagatcgccggcaat
gagacgaacggcgccgccgccaccacggaggatcagcagtcactcctccccgtcctctct
gagacaaccctccctgaagcaccggttacgtggaccaagcccaagttactgagcacggtg
gactggtatggtgccgatttgccccagctccctagtgtctctgaaaacaccacgaacggg
cagagcgatggtacttccatggcccttgtgaaggttgaagagcctgacaatgctcctggc
gacacggagctgatcaacaatgtccctgtccccaaactccgcactgcctccaataatccg
ctctcatctgtgggcaacggcatcgacgaaaacagcatcgaccccgaggccagcaagatt
gctgtgatcctcaagttccagctgaaggctagcaactacgccaccattgtcctccgcgag
ctcatgggcacgaccgctgaagagcgtgccctttga
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