Thermothielavioides terrestris: THITE_2120154
Help
Entry
THITE_2120154 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
THITE_2120154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ttt03041
]
THITE_2120154
03009 Ribosome biogenesis [BR:
ttt03009
]
THITE_2120154
Enzymes [BR:
ttt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
THITE_2120154
Spliceosome [BR:
ttt03041
]
Complex A
U1 snRNP components
U1 related factors
THITE_2120154
Complex B
THITE_2120154
Ribosome biogenesis [BR:
ttt03009
]
Eukaryotic type
Pre-60S particles
Helicases
THITE_2120154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
GRP
Glyoxalase_3
P-loop_SecA
DUF2443
Utp25_C
Motif
Other DBs
NCBI-GeneID:
11520088
NCBI-ProteinID:
XP_003655899
JGI:
Thite2_2120154
UniProt:
G2R9L9
LinkDB
All DBs
Position
4:complement(join(3650110..3650168,3650228..3650386,3650451..3650579,3651068..3651175,3651235..3652391,3652526..3652620))
Genome browser
AA seq
568 aa
AA seq
DB search
MSSYGGGYSSRGGGGYSGGYDRNGGGYSGGYSGSNGYSGGGSGYGGGGYGGSSGGYGGGG
YGGGYGGGYGGGYGGGGDRMSNLGAGLQKQTWDMDSLSKFEKSFYQEHPNVSNRSQAEVD
KFRRDHAITVSGRDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDV
VGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQQEMTKFGKSS
RIRNTCVYGGVPKGPQIRDLQRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRML
DMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVRNLAADFLTDFIQVNIGSMDLAANHRIT
QIVEVVSESEKRDRMIKHLEKIMDGRDTQNKVLIFTGTKRVADDITRFLRQDGWPALSIH
GDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRT
GRAGAKGTAITFFTTDNAKQARDLVSVLQEAKQHIDPRLAEMARYSGGGGSSRYGGYRGR
GGGGYRGGKCRSAGVNGANAMPIGNRRW
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctacggtggcggctacagctcccgcggcggcggcggatactcgggcggttat
gatcgcaatggtggaggctactccggcggttactctggctcaaatggctattccggcggt
ggcagcggttacggtggcggcggctatggcggaagcagtggcggctacggcggtggtgga
tatggcggtggatacggcggcggctacggcggtggctacggaggcggcggcgaccgcatg
tcgaacctgggtgccggcctgcagaagcagacttgggatatggactcgctttccaagttt
gagaagtcgttctaccaggagcatccgaacgtcagcaaccgctcgcaggccgaggtcgac
aagttccgtcgcgatcatgccatcaccgtctctggccgcgatgttccgaagcccgtcgag
acctttgacgaagccggcttcccccgttatgtcatggacgaggtgaaggcccagggcttt
cccgcaccgactgccattcagtctcaaggctggcccatggccctctctggccgcgacgtc
gtcggtattgctgagaccggctccggcaagaccctgacatactgccttcctgccatcgtc
cacatcaacgctcaaccgctcctcgcacccggcgacggcccgatcgtgctggtcctggcg
cccacccgtgagctcgccgttcagatccaacaggaaatgaccaagttcggaaagtcgtct
cgcatccgcaacacttgcgtctacggcggtgttcccaaaggcccccagatccgggatctc
cagcgcggcgtcgaagtgtgcattgccacccccgggcgtctgattgatatgctcgagtcc
ggcaagacgaacctccgtcgcgtcacttacttggtcctcgacgaggctgatcggatgctg
gacatgggtttcgagccccaaattcgcaagattatcgagcagatccggcccgatcgtcag
actctcatgtggtctgccacttggcccaaggaggtccgcaacctggcggcggacttcctg
accgatttcatccaggtcaacattggttccatggacttggctgccaaccaccgtatcacc
cagatcgtcgaggtggtgtcggagagcgaaaagcgtgataggatgattaagcatctcgag
aaaatcatggacggccgagacacccagaacaaggtcctcatcttcacgggcaccaagcgt
gttgctgacgacatcacccgattcctccgccaagatggctggccggcgctctcgatccac
ggcgacaagcaacagaacgagcgtgactgggtcctcgaccagttcaagacgggcaagagc
cctatcatggttgccactgacgtcgcgtcccgtggcattgatgtgcgcaacattactcat
gtgctcaactatgactaccccaacaactcggaggattacatccaccgtattggcagaact
ggccgtgccggcgccaagggcacagccatcaccttcttcaccactgacaatgccaagcag
gctcgtgacctcgtgagtgtcctccaggaggccaagcagcacattgatcctcgccttgcc
gagatggctcggtacagtggtgggggtggcagcagccgatacggcggataccgtggccgc
ggcggtggtggataccgtggcggtaagtgccgttcggcaggcgttaatggcgcgaacgct
atgcccattggcaaccgtcggtggtaa
DBGET
integrated database retrieval system
