Thermothielavioides terrestris: THITE_2120376
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Entry
THITE_2120376 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K14848
ribosome assembly protein RRB1
Organism
ttt
Thermothielavioides terrestris
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ttt03009
]
THITE_2120376
Ribosome biogenesis [BR:
ttt03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
THITE_2120376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_RIG_2nd
CAF1C_H4-bd
Beta-prop_EIPR1
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
MIOS_WD40
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
NBCH_WD40
Beta-prop_Vps41
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
11524257
NCBI-ProteinID:
XP_003656022
JGI:
Thite2_2120376
UniProt:
G2RAF1
LinkDB
All DBs
Position
4:complement(4213537..4215042)
Genome browser
AA seq
501 aa
AA seq
DB search
MVKRTADEEAAAGPLKAGERPDAMDVDDKHNDMGEFEDEFEDEFESEDEIIEAGVDGRPD
AEREAEEAMDVDQAGPGTFIVGRTKLEPGQTLAPDPTTYRMLHNLSTPWPCLSFDIIRDG
LGDNRSVYPATMYTVAGTQADSAKASDNSIMVMKFSGLSKMQGDDDEESSDDESDDEDAD
PILEHKSIPLNTTTNRIRAHQTPSQDPARPPTTLTATMTESTNVFIHDITPHLSSFDTPG
TIVTPQQNKPLCTIRAHKSEGYAVDWSPLHAAGKLLTGDNDGLIYVTTRTDGGGFVTDTR
AFQGHTSSVEEIQWSPSEASVFASASSDGTIRVWDVRSKARKPALTMQVSDVDVNVMSWS
RQTTHLLASGDDAGVWAVWDLRQWKPSAGGSAAAASAAVQRPSPVASFNFHKEQITSVEW
HPTDDSIVAVSAGDNTVSLWDLAVELDDEESRDTAGVQDVPPQLLFVHYQNLAKEVHWHP
QIPGVLVATGEEFSVFRTISV
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagcgcacggccgacgaagaggccgccgccggcccgctcaaggctggcgagcgg
ccggacgccatggacgtcgacgacaagcacaacgatatgggcgagttcgaggacgaattc
gaggacgagtttgagagcgaggacgagatcatcgaggccggcgtggacgggcgaccagat
gcagaacgggaagccgaggaggccatggacgtcgaccaagccggtcccggcaccttcatc
gtcggccgcacgaagctcgagcccggccagacgctcgcgcccgacccgaccacataccgc
atgctgcacaacctgagcacaccgtggccatgtctgtcgttcgacatcatccgcgacggc
ctgggcgacaaccgcagcgtgtatcccgccaccatgtacaccgtggctggcacgcaggcc
gacagcgccaaggccagcgacaactccatcatggtcatgaagttcagcggcctcagcaag
atgcagggcgacgacgatgaggaatcgagcgacgacgagtccgacgacgaggacgcggat
cccatcctcgagcacaagagtatcccgctcaacacgaccacaaaccggatacgagcgcac
caaacaccctcccaagaccccgccagaccccccaccactctcacggcgaccatgaccgag
tcgaccaacgtcttcatccacgacatcacaccgcacctctcctcattcgacactcccggc
accatcgtcacgccgcaacaaaacaagccgctctgcaccatccgcgcccacaagtcggag
ggctatgcagtcgactggtcgcccctgcatgccgccgggaagctcctgacgggcgacaac
gacggcctgatctacgtgacaacgcgcaccgacggcggcggcttcgtcaccgacacgcgg
gccttccagggccacacctccagcgtcgaggagatccagtggagcccgtccgaggcgtcc
gtcttcgcgtccgcctcgagcgacggcaccatccgcgtgtgggacgtgcggtccaaggcc
cgcaagccggcgctgacgatgcaggtgagcgacgtggacgtcaacgtcatgtcgtggtcg
cggcagaccacccacctgctcgcgtcgggcgacgacgccggcgtctgggccgtctgggac
ctgcggcagtggaagccgagcgcgggcgggagtgcggctgcggcgtcggcggcggtccag
cggccgagccccgttgcgagcttcaacttccacaaggagcagatcaccagcgtcgagtgg
cacccgaccgacgacagcatcgtcgccgtctcggcgggcgacaacacggtgtcgctgtgg
gatctggcggtcgagctggacgacgaggagagcagggataccgcgggcgtgcaggacgtg
ccgccgcagctgctgtttgtgcactaccagaacctggccaaggaggtgcactggcacccc
cagataccgggtgtgctggtggccacgggcgaggagttcagtgtgttcaggaccatcagc
gtatag
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integrated database retrieval system