Thermothielavioides terrestris: THITE_2120901
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Entry
THITE_2120901 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K13174
THO complex subunit 5
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
THITE_2120901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2120901
03041 Spliceosome [BR:
ttt03041
]
THITE_2120901
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
THITE_2120901
Spliceosome [BR:
ttt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
THITE_2120901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
TSC22
RickCE_cat
KIF21A
Motif
Other DBs
NCBI-GeneID:
11519832
NCBI-ProteinID:
XP_003656383
JGI:
Thite2_2120901
UniProt:
G2RE20
LinkDB
All DBs
Position
5:complement(join(998322..998363,998427..998670,998754..999112))
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AA seq
214 aa
AA seq
DB search
MNANAHITDPALASVLETSRTAREQAQALVDLIAHATTANAGGPLAADALIEISKQQKLL
NTNLAHLRGLHRAAHFRARETKSLTAEARHEVDVLHLQLQNLYYEQRHLEGEIAACEGFD
HTYQLLPLIPVEEFLEKHPELADADENALMVARINHERAEREALEQQRLELQKRKQKLIA
ENKKRRDDLANLDKDLEKFIDAAKPIQKMFEKVV
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaacgcgcacatcaccgaccccgccctggcctccgtgctcgagacgtcccgc
acagcgcgagagcaggcgcaggcgctggtcgacctgatcgcgcatgccacgaccgccaac
gccggcggccccctcgccgcggatgccctgatcgagatctcgaaacagcagaaattgttg
aataccaacctggctcacttgcgcgggttgcaccgcgcggcccacttccgcgcgcgggaa
accaagagcctgacggccgaggcccgacacgaggtagacgtgctgcacctccagctgcag
aacctgtactatgaacaacggcacctggaaggggagattgccgcttgtgagggattcgat
cacacgtaccagctcctcccgctcatcccggtggaagagttcctcgagaaacaccccgag
cttgccgatgccgacgagaacgcgctaatggtggcccgtatcaaccatgagcgggcggag
cgcgaggcgctggagcaacagcggctggaactccagaagcgcaagcagaagctcatcgcc
gagaacaagaagcgcagggacgacttggccaacttggacaaggatctggaaaagtttatt
gacgctgccaaacctatccagaagatgtttgagaaggtggtttga
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