Thermothielavioides terrestris: THITE_2121120
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Entry
THITE_2121120 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K06100
symplekin
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
THITE_2121120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttt03021
]
THITE_2121120
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2121120
Transcription machinery [BR:
ttt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
THITE_2121120
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
THITE_2121120
U7-dependent histone pre-mRNA processing factors
THITE_2121120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
11519713
NCBI-ProteinID:
XP_003656466
JGI:
Thite2_2121120
UniProt:
G2REF8
LinkDB
All DBs
Position
5:join(1283675..1284033,1284138..1284303,1284368..1284495,1284552..1284755,1284820..1285165,1285229..1286144,1286205..1286329)
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AA seq
747 aa
AA seq
DB search
MAADATDASSKTLSVAEQLEQLNAARKLVLDNIAYYDRIVKGVLPIIGPTAALELRRWGA
EFLAESLATPVLTMRDKENITVAVLDTLRRLIEGAGEDVIVLKACVAAAASAYPIALRWI
IHNSYHAESWEQMSATKSRILHIWDGAPAPVKLSCIKFAQRVVLCQTASNGMEQKYNGLD
ISLNMVPPNHPLLDPRQLEAEATGLLDRMLGVLQDNSSDALLVDATLNCLSILIRTRPAT
SNRILNAVLNFNPLKLANSPMTPKTRVLVQSLVKTTRIFLTNLLKRDPHNPMSGRIQQYL
ERLMRSRTEIFDEAGRKRALADHTAAAYGDAKRQKLEGGVAQVSIPPLGPGPHTLAAVFA
LTSNLGLQGFDATQLPANLAARISVSALATLDEQVLNFAVAGVRDRLASLYGAGPAAAAG
EPSVINAATAPLGVEEEDDDYEPDLTLAEDTEQILNKLDNAPPEEVIEPAADAAAALALG
PFKLPPPPALDPDTAASLSQAAASRVFGPVSALKDGGAVRKSKAGINRLAASSYDHESWM
TLITRLATRSTAGLDDVSSSIKQEDAGSALDRPRVSLGDTIREMLYTYILEDWRRRIEIA
VAWLCEEWYNDQLTKRSGSNAPLHYEKWTLRLVDGFLSYITTQDKVLTRFLAEIPELSKA
LLGKLKGLCADPTTVQLALTSLLYLVMMRPPVREIALDTVADIWSEYEDARPLAAKYLAK
WRPGFIESQTRGAQGDAAPANNVAIAA
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacgcgaccgacgcatcgtccaagacgctctcggtcgccgagcagctggag
cagctcaatgcggcgcgcaagctagtgctcgataacatcgcctactacgaccgcatcgtt
aagggcgtgctgcccatcatcgggcccacggcggcgctcgagctgcggcgatggggcgcc
gagttcctggccgagtcgttggccacgccggtcctgaccatgcgcgacaaggagaacatt
acggtggcggtgcttgacacgctcaggaggctgattgagggtgctggcgaggatgtcatc
gtgttgaaggcctgtgtcgcggcggcggcaagcgcgtaccccatcgctctgagatggata
attcacaactcctaccatgcagaaagctgggaacaaatgtcggccaccaagtcgaggata
ttacatatctgggatggggcgccagctccggtcaagctgagctgtatcaaatttgcccag
cgagttgtactttgccagaccgcatcaaatgggatggagcaaaagtacaacggactcgat
atctccttgaacatggtcccgccgaaccaccccttgttagacccccggcaactcgaagca
gaggcaaccggcctcctggataggatgttaggggtattgcaggacaacagcagcgacgct
ctgcttgtcgatgccaccctcaactgcctgtcgatcttgatccgaacccggccggccaca
tcgaaccgcatcctcaacgcggtgctcaacttcaaccctctgaagctggctaactctccc
atgacgccgaaaacaagagtactagtacagtctctggtgaagaccactcgcatatttctc
accaatctgcttaaacgggacccgcacaatccgatgtcgggacgcatccagcaatacctt
gagcggctgatgcgctcacgaaccgagatcttcgacgaggcaggccgcaagcgggctctt
gctgaccacactgcggctgcttatggagacgccaaaaggcagaagctggagggcggggtt
gctcaagtctccatcccgccgctggggccagggccgcacactcttgctgcggtattcgcc
ctgacaagcaatctcggccttcaagggtttgatgccactcaacttcctgcaaatctcgcc
gccaggatcagcgtcagcgcgttggccacattagacgagcaggttctgaactttgctgtc
gctggtgtccgggatcgtctcgcatctctttacggtgcagggccggcggcagcagcggga
gaaccctcggtgatcaacgccgcaacagctccattgggcgttgaagaggaggacgatgac
tacgagccagacctgactctggcagaagataccgagcagatccttaacaagctcgataac
gcgcctccggaagaggtgatcgaaccggcggccgacgctgctgcagcgctggctctcggc
cccttcaagcttccgcctcctcctgcactcgaccctgatactgccgctagcctcagtcaa
gcggcagcttctcgcgtcttcgggccggtgtcagctctcaaagacggcggcgccgtgcgg
aaatcgaaggctggcatcaaccggcttgcagcgagctcctacgaccacgagtcgtggatg
accctcatcacgcgcctcgccactcgaagcacggcgggtctcgacgacgtcagcagcagc
atcaagcaggaagacgcaggttcggcgctcgaccgaccgcgcgtgtccctgggcgacacc
atccgcgagatgctctacacctacatcctcgaggactggcggcggcgcatagagatcgcc
gttgcttggctctgcgaggagtggtacaacgaccagctgaccaagcgcagcggcagcaac
gcgcccctgcactacgaaaagtggacgctgcggctggttgacgggtttctgagctacatc
acgacgcaagacaaggtgctgacgaggttccttgccgagatacccgaattgagcaaggcg
ctgctggggaagctgaagggactctgcgcggacccgacgacggtgcaacttgcactgacg
agtctgctgtatctggtcatgatgcggccgccagtaagagagatcgcgttagacacggtg
gcggatatctggtctgagtatgaggatgctcgccccttggcggccaagtatcttgccaag
tggcggccgggcttcatcgagtcacagactcgcggtgctcagggcgatgcggcccctgct
aacaacgtggcgatcgcggcgtga
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