Thermothielavioides terrestris: THITE_2121894
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Entry
THITE_2121894 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K14306
nuclear pore complex protein Nup62
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
THITE_2121894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2121894
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
THITE_2121894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
DUF948
RSS_P20
ATG17_like
Nuf2_DHR10-like
Motif
Other DBs
NCBI-GeneID:
11522726
NCBI-ProteinID:
XP_003656777
JGI:
Thite2_2121894
UniProt:
G2RFF8
LinkDB
All DBs
Position
5:join(2350546..2352450,2352514..2352705)
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AA seq
698 aa
AA seq
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MSFNFGTPASSAASGQSTTTTAPASGGLFGSAAGTTFSFGKPAGSGTSTPQTGGGLFGQT
PASTGQAGGLFGNAGASTTPSTSAPSTSTPLFGQQAGATSGGSSLFGNASKPTGALFGNT
STPATGTATPTGTPNLFGNKPAATTATTAAPSTGTQGATTGGLFGSATTAPQSGTPTTSA
TGGLFGNVSGSLFGSTTPATTTSGAQATPAKPLFGGLGSTTPAGAPPTDASKPAGALFGA
SLGTKPTTSGATSGGLFGQSATPATTTTQAPSTGSTAPAAGGLFGKTGSTPAAGGTSSLF
GSAQPAAAATSGANTPTTTAPAAAAKPLFGSAAGAQSASTATPATTTAPAASSATTTPSL
FGAATSASTAAAGSTPASSNLFNLKPATTTAAPSSAAPASASNLFAKPASTTAPSTTATT
TATAPATTTAAATTSAPATTGLFGGAKPAGTTTTPAQDGKSSTAATLSASTMGPTSQLPR
LKNKTMDEIITRWATDLSKYQKEFKEQAAKIAEWDRMLVDNGEKIQKLYTSTYEAERASS
EIERQLSNVESQQEELAAWLDRYEADLDELFAKQGGGGGGGEQVGGPDQERERTYKLAEK
LTDRLDDMGKDLTKMIKEINDMSSTLSKGSKPDDPLTQIVRVLNGHLAQLQWIDSNAAAL
QAKVAAAQKASGNMGPSVSSTESDAAESFYRSYRGGYR
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcaacttcggaacgcccgcgtcgagcgcggcttcaggccagtcgacgacgaca
acggccccagcttctggcggcctgtttggtagcgcggctggcacaaccttctcgttcggc
aaacccgctggcagcggaacaagcacgcctcagactggtggagggttgtttgggcagact
ccggcatcaaccggtcaggctggaggcctgttcggcaacgcgggcgccagtacgactcct
tcaacgtccgcgccctccactagcacgccgcttttcgggcagcaggctggcgctacatcc
ggagggtcgtcgttgtttggcaacgccagcaagcccacgggggcgctgtttggcaacacg
tctacccctgctacgggaacggcaacccctactgggacgccgaacctcttcggcaacaag
cctgctgctacgactgctacgactgctgctccatccacaggcactcagggtgcgacaaca
ggcggactctttgggtccgcaaccacggcgccccagtcgggtacaccaacaacttcagca
acgggtgggttgtttggaaacgtgagtggttctctattcggctctacaactcccgccact
accacgagcggagctcaggctaccccggcaaagccgctattcggggggcttgggtcgacc
acaccggccggcgcacctcccaccgatgcgtccaagcctgctggagcactgttcggagct
agcctcgggaccaagccgacaacctctggagcgacgagtggcggcctattcggacaatct
gcaacgccggctacaactacgacgcaggctccttcgaccggttctacggcaccggcagcg
ggagggctcttcggcaagaccggatccaccccagccgcaggaggcacgtcgtctctcttt
ggcagcgctcagcctgccgccgccgccacatccggcgccaacactcctaccaccaccgca
ccggcagcagccgcgaagcctctctttgggagtgctgctggcgctcagtccgcttccaca
gctacccctgcaactactacagcacccgcggcatcttcggcaaccacaactccgagcttg
ttcggcgccgccacctccgccagcacggcggctgctggctcgactccagccagttcgaac
ctgttcaacttgaagccggcgacgaccactgcagctcccagctccgctgctcctgcgtcc
gcgagcaacctgttcgccaagccggcctctaccacagcccccagcactaccgccaccaca
acagcaactgcccccgctaccaccactgctgccgccactacttccgcccctgcaacaaca
ggcttgtttggtggcgccaagcctgccggcacaaccaccacgccagcgcaggatggcaag
agcagcaccgccgcgacgctctcggcatcgaccatgggccctacgtcgcaattgccgcgt
ctgaagaacaagaccatggacgagatcatcacgcggtgggcgacggacctgtccaagtac
cagaaggagttcaaggagcaagcggccaagattgccgagtgggaccggatgttggtcgac
aacggcgagaagatccagaagctgtacacgtccacctacgaggctgagcgcgccagcagc
gagatcgagcgtcagttgtccaacgtcgaaagccagcaggaggagctcgcggcgtggctg
gaccgctacgaggccgacctggacgagctcttcgcaaagcagggcggcggcggcggcggg
ggtgagcaggttggcggcccggatcaggagcgcgagcgcacctacaagctggccgagaag
ctgacggaccggctggacgacatgggcaaggacctgaccaaaatgatcaaggagatcaat
gacatgtcgagcacgctcagcaagggcagcaagcccgatgatccgttgacgcagatcgtg
cgggtcctgaacgggcatctcgcccagctgcagtggatcgacagcaacgcggccgcgctc
caggccaaggtggccgccgcgcagaaggccagcggcaacatgggccccagcgtctcgagc
accgagtcggacgcggccgagagcttttaccggtcgtatcggggcgggtacagatga
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