Thermothielavioides terrestris: THITE_2121926
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Entry
THITE_2121926 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
THITE_2121926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttt03021
]
THITE_2121926
Enzymes [BR:
ttt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
THITE_2121926
Transcription machinery [BR:
ttt03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
THITE_2121926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
DUF7479
Motif
Other DBs
NCBI-GeneID:
11522903
NCBI-ProteinID:
XP_003656793
JGI:
Thite2_2121926
UniProt:
G2RFH4
LinkDB
All DBs
Position
5:complement(join(2389529..2392765,2392833..2393306))
Genome browser
AA seq
1236 aa
AA seq
DB search
MAPEKRTDTSWDHEYNTLRRENLFRNPPTDRTAYPALQLAVDPHIESFNALFRNDGKTSL
LDHALAEIGTKTFLDGDDRAAPAGKNKLTIRYKSVTLQRSQVPPTNKFAKRREIFPAECR
ERHVTYRGKLTAVFEYRINDGEPMEFSRELGQMPIMVKSNKCHLENNPPALLVQRKEESE
ELGGYFIVNGIEKIIRLLLVNKRNFPLAITRPSFTNRGPSYTPYGIIVRSVRPDETSQTN
VLHYLNDGNVTFRFSWRKNEYLVPVMMILKALVETNDREIFEGLVGPPNSKGIENTFLTD
RVELLLRTYKTYGLYTKTQTRAYLGEKFRVVLGVPDTMSDYEVGTEFLRKIVLVHLGCVD
VTEEQDLDKFKMLLFMCRKLYALVAGDCAIDNPDAVQNQEILLGGFLYGMILKEKLDEFL
SVSVRGALRDYLRNHATVSFTSPTFQRDFPVAIFRKANENIGNALEYFLSTGNLQSPSGL
DLQQTSGFTVVAEKLNFLRFISHFRMVHRGSFFAQLKTTTVRRLLPESWGFLCPVHTPDG
APCGLLNHLAHKCKIMTDSLDVSAVPGVAMELGVNDYSSAATSESVVVMLDGRIIGWCTP
RAAKGVADSLRRWKVEGGHGIPVQLEIGYVPPSRGGSYPGIYMSSRPARMVRPVKYLALG
KEDFVGPHEQPYMSIACTEAEVIPGDSTHVEFDPTNILSILANMTPFSDFNQSPRNMYQC
QMGKQTMGTPGTALRYRTDNKTYRLQTGQTPIVRSPLHNTYGFDNFPNGTNAVVAVISYT
GYDMDDAMIINKSAHERGFGHGTIYKTKKISLKDDDTRARSSKAIVKMFGFAPGSAVRAS
DREMLDEDGLPYVGRLVRQGDILYAWHTVSADYSGQLINRDGITHWERYKDSEDAFVEEV
RVIGSDTGNEPLQTVSIKLRVPRSPVIGDKFSSRHGQKGVCSQKWPAIDMPFSESGIQPD
VIINPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPFKFDEENTAADYFGHQLMKAGFN
YHGNEPMYSGITGEEFACDIYIGVVYYQRLRHMVNDKYQVRTTGPVVPTTGQPIKGRKKG
GGIRVGEMERDALLAHGTAFLLQDRLLNCSDYSKSWICRSCGSFLAVQPTVSPFIGKRKQ
VGTVRCRNCAKRLDQVEDLDLMKLDGEIWEDGQGVQWIGGENTTMVVVPGALKFLDAELA
AMGVKLKYRVDTKDVVRRGPLMATAPKALTNGIAAA
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgaaaagcgcactgatacgtcgtgggatcacgaatacaacacccttcgccgc
gagaatctgtttcggaaccccccgaccgaccgcaccgcctatcccgccctccagcttgcc
gttgacccccacattgagtccttcaacgcgctcttccgaaacgacggcaagaccagcctc
ctcgaccatgccctcgccgaaatcgggacaaagacgtttctggacggggatgacagggcc
gcgcctgcggggaagaataagctgacgatccggtacaagagtgtcacccttcagcgatct
caggttccgccaaccaacaaattcgccaagaggcgtgagatcttcccggcggagtgcagg
gaacgccatgtcacgtaccggggaaagctcacagccgttttcgaataccgcatcaacgat
ggcgagcccatggagttctcgcgggagctggggcagatgccgatcatggttaagtccaac
aaatgccaccttgagaataatccaccagcactccttgtgcagaggaaggaggagtctgag
gaactcggcggatatttcatcgtcaacggcatcgagaagattattcgcttgctgctggtc
aacaagaggaacttcccgctggctatcacccgtccgagtttcacaaaccgaggtccctca
tatacgccgtacggtatcatagtacgatccgtccggcccgatgaaacctcccagacgaat
gtgctccactacttgaacgacggcaatgtcacgttcaggttctcgtggaggaagaacgag
tatctcgtgcccgtcatgatgattctcaaggctcttgtcgagacaaatgatcgggagatt
ttcgagggtctcgttggcccgcccaactcgaagggcatcgagaacaccttcctgaccgac
cgagtcgaactgctcctccgcacctacaagacttacggcctttacaccaagacacagacc
cgggcctacctgggcgagaagttcagggtcgtgctcggtgtccccgacaccatgtcggac
tacgaagtcggcaccgagttcctccgcaagatcgtgctcgttcacctgggctgcgtcgac
gttaccgaggagcaggatctcgacaagttcaagatgctcctgttcatgtgccggaagctt
tatgcactcgtggctggcgattgtgccatcgataaccctgatgcggtgcaaaatcaggaa
atcctacttggtggcttcctgtacggcatgatcttgaaagagaagttggacgagttcctg
tccgtctctgtcagaggagccctgcgcgattacctgaggaaccacgcgacggtctcgttc
acgagtcccacattccagagggacttcccggttgctatcttcaggaaggcaaacgagaac
attggtaacgcgctagagtacttcctctcgacgggcaatcttcagagcccctcaggtctt
gacctgcaacagacatcgggtttcacggtcgtggccgagaaactcaacttcctgcgtttc
atcagccatttccgcatggtccaccgaggtagcttcttcgcacagctcaagacgacgacg
gtcagaaggctgctgcccgagtcctggggcttcctgtgccccgtgcacacccctgatggt
gcgccgtgtgggctgctgaatcacttggcgcacaagtgcaaaatcatgacggactcattg
gacgtgtcggccgtcccaggcgttgccatggagttgggagtcaacgactactcctcggcg
gccaccagcgagagcgtggtcgtgatgctcgatggcaggatcatcggctggtgcactcct
cgagcagccaagggggtcgccgacagcctgcggcgctggaaggtggagggcggccatggc
atccccgtacagctggagatcggctacgtgcctccgtccaggggcgggtcctatcccggt
atctacatgtcctcacggccggccaggatggtccggcccgtcaagtatctggccctgggc
aaggaggactttgtcggcccccacgagcagccgtacatgtcgatcgcgtgcacggaggcc
gaggtcatccccggcgactcgacacatgtcgagttcgacccaaccaacatcctctccatc
ctcgcgaacatgacacccttctccgacttcaaccaatccccgcgcaacatgtaccagtgt
cagatgggtaagcaaacaatgggcacgccgggcacggcgctccggtaccgcacagacaac
aagacctaccggctgcagacgggccagacgcccatcgtgcgctcgccgttgcacaatacg
tacgggttcgacaacttccccaacggcacaaacgccgtggttgccgtcatctcgtacacg
ggctatgacatggatgacgccatgatcatcaacaagtcggcacacgagcgcggctttggc
cacgggacgatctacaagaccaagaaaatcagcctcaaggacgacgacaccagggcgcgc
tcgtccaaggcgatagtcaagatgtttggcttcgcccccggcagcgcggtccgggcgtca
gaccgggagatgctggacgaggatgggctgccgtacgtggggcgtctggtgaggcaggga
gacatcctctacgcgtggcacacggtctcggccgactatagcgggcagctgatcaaccgc
gatggcatcacgcactgggagaggtacaaggacagcgaggatgccttcgtcgaggaggtg
cgcgtgatcggcagcgacacgggtaacgaacccctgcagacggtctcgatcaagctccgc
gtgccgcggtctcccgtcatcggcgacaagttctcgtcccgccacgggcagaagggagtc
tgctcgcagaagtggccggccatcgacatgcctttctccgagtcgggcatccagcctgat
gtcatcatcaacccgcacgcgttcccctcgcgcatgacgatcggcatgttcgtcgagtcc
ctggcgggcaaggccggcgccttgcacggcctggcgcaggactcgacgccgttcaagttt
gatgaggagaacacggcggccgactacttcgggcaccagctgatgaaggcgggcttcaac
taccacggcaacgagcccatgtactcgggcatcacgggcgaggagttcgcgtgcgacatc
tacatcggcgtcgtctactaccagcgactgagacacatggtcaacgacaagtaccaggtg
cgcaccaccggccccgtggtgccgacgacgggccagccgatcaagggccgcaagaagggt
ggcggtatccgcgtgggagaaatggagcgcgatgctctgctggcgcacggcacggccttc
ctgctccaagacaggctgctcaactgctccgactactccaagtcgtggatatgccgaagc
tgcggttcgttcttggccgtgcagccgacggtatccccgttcatcggcaagcggaagcag
gtcggcaccgtccgttgccggaactgcgcaaagcgcctggatcaggtggaggacctggat
ctcatgaagttggatggcgagatctgggaggacgggcagggcgtgcagtggatcgggggc
gagaacaccaccatggtggtcgtgccgggggcgttgaaattcctcgacgccgagctcgcg
gcgatgggtgtcaagctgaagtaccgggtggataccaaggacgtggttcggagggggccg
ctgatggccacggcaccgaaagcgctaacgaacggaatagcggcggcgtga
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