Thermothielavioides terrestris: THITE_2122100
Help
Entry
THITE_2122100 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt04138
Autophagy - yeast
ttt04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
THITE_2122100
04148 Efferocytosis
THITE_2122100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ttt04131
]
THITE_2122100
Membrane trafficking [BR:
ttt04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
THITE_2122100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
TPR_VPS8_2
VPS8_N
TPR_Vps41
Beta-prop_EML
Clathrin
zf_RING_Vps8_fungal
zf-RING_Vps41
Beta-prop_HPS5
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf_RING_Vps8
WD40_CDC20-Fz
PHD_NSD
zf-C3HC4
Beta-prop_WDR3_1st
Beta-prop_EML_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
11519442
NCBI-ProteinID:
XP_003656856
JGI:
Thite2_2122100
UniProt:
G2RC85
LinkDB
All DBs
Position
5:complement(join(2613920..2618055,2618106..2618541,2618595..2618900))
Genome browser
AA seq
1625 aa
AA seq
DB search
MADEPELARADDDQSSSSSDEATVKGDHDEDHIPTVPEAEQRPAESPAPHAGPSTIAHRY
RELLEASHDAASEDGSADATPRLAASPMGSVLSVPDDTPSLHGSVISSPGSSNVPSFASR
PDLASPTPSFRPFDQRFQSRISSPYLSSPRPSSPAFLAGHSRNVSLSSQLLLDPGGTETP
SAPWEVVRWTKLQKLNGQVFSEAGKRNFGSPTCLAVSATIVLGTSKGIILVFDYNQNLKM
IIGPGTKAVESGPITAIAISADHTTIAGGHANGNIFTWDTTRAARPFLSIPHLPQLHQQN
RTADGHVPNVAITHLGFLGTRHTALVSADDRGMAFSHLATRGTGALGRTVKTTRILGRYP
DSKPPPGKTLKPSTVLAFAPLPLGNVEMATDTMGLTAMLTPYLLVIVSTTPIAQTQHKSA
RPKEVAAHSPLTGCLAWFPGVKLKVADPVTGSQISKVKLVYCWSNVLTVLDVDEIPAEDK
DKPPGLKFRARSRWKCEEPIVAVQWLSRSVLTVLTISQRLIVLEDRSMRMTEAIDLIHKH
IYHVDRFSKQLSSLVEQLDEEDPSMHGVVADAFYMSFKAFKGRLFLLGFNDVSIGALSNW
ADRLIALMENGDYVGAIKLATSYYSGDANKLTVGLPEDAELRHSMVRDKLMEIMSASLKY
AFGQRRKNRESASDSHLRELTQTCFVGCLTVGEVDFLFEEMYEWYEDAAVEGIFFETLEP
YILDGSVTAVPPAVVKAMVSHFVGAGLESRLEEMICHMDTSTLDLDQITVLCKQHSLYEA
LIYVWNRAMNDFLTPLFDLLSLLVPLTQKGQHSGGPMQAEARVVNALKIFPYLSYVLTGR
VYPTGEELPEEVAQKAKAELYWLFFSGKSITWPRGSNKRLLTRPNQSQEPSFPYLRLVLD
FDAASFLSALNEAFEDSFLNDSKSANGSSTRDLPEEQMFGLTVDRQYIVSILTEIMNSSD
FSSNETIYLDMFIARNLPKYPQYLLFPGSTLTKVLVGLCRYPGQDLAEDAQLSAEYLLSV
YQPPNVTELIPLFKEAGFYRILKRIYRVDKQYGKLVETYFEDPEDQEAVFNCIEVYLRPQ
AGLTRRQVQDVHQVLKQHSAEFVELDPAMAAKTIARHAPELHQHVLDSVAAQPGLQYAYL
KTILEPEKEAALGRSTDRDLVELYLRLMCKFDPEHVSDYVGLVQSSSLRLEQLLPTMEAT
GVIDAAVVLMAKEGQVKEAMGRLVRHLETLESALQGLLAGSQDDSCDLQESAEDLMQALR
KFVLVGIWLCQEQTKTARAASSSRRGQKPPADGSLSANENLWLELIDASVQITRRLSSSL
QTAPKNALPPTNGDAAYQPPALDTDKLLGLLRSLVQTTFTALLTSTSSPSTTPPSTTTST
TTNLSFLRILRAFLTRAAAASPNLADLRGVLSSVFAAYAYEESILRLSNRLLERSLFVSV
AQAVELRQRGWRPRGPTCEACGRRVWGPGVQGGRVYEAWEERKVAEERRRAAILRRRGGA
GGVGLGAGAGDRLGDAAGSAERGGAEEREYVGKGKGKDVSPRVRQEEEEIQEGHRRQGKG
NEAKQDPREGLVGAGGSSSRPPDQTALGPLVLLACRHIYHQSCLEALLAKDGFGTETVYR
CPIDG
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaacccgaactggctcgagccgacgacgaccagagctcgagctccagcgac
gaggctacggtgaaaggcgatcacgacgaagaccacatccccactgttcccgaagctgag
cagcggccggcggaatcccccgcgcctcacgccggtcccagcacaatcgcccaccgctac
cgagaactgctcgaggcgtcgcacgacgcggcatccgaggatggatccgccgacgccaca
ccccggctcgctgcgagtcccatgggctccgttctttccgttcccgatgacacgccatct
ttgcatggctccgtcatatcctcccctggcagcagcaatgtgccttccttcgcctctcgc
cctgacctcgccagcccgacgccgtcgtttaggccctttgaccagagattccagtcacgc
atctcctcgccttatctctcgtccccgcgtccttcctctcctgcattcctggcaggccat
agccgaaatgtctcgctgagcagtcagctgctgttggacccagggggcaccgaaaccccg
tcagcgccgtgggaagtggtgcggtggacgaagctgcagaagctcaatggccaggtcttc
tccgaggccgggaagagaaactttggctctcctacgtgcctcgcggtttcggctacgata
gtcctgggcacctccaaggggatcatcctggtgttcgactacaaccagaacctcaagatg
ataatcggtccgggaacaaaagctgtcgaatccggccccatcaccgccatcgcaatatcc
gccgaccacaccaccattgcgggcgggcacgcgaacggcaacatatttacctgggatacc
acgcgagcagcacggccgttcctcagcatcccgcaccttcctcagttacaccagcaaaac
aggaccgccgacggccacgtcccgaatgtcgccatcacgcacttgggcttccttggcacc
cgccacacggccctcgtctccgccgacgaccggggaatggccttctctcacctcgcaacc
aggggcaccggggctcttggcaggaccgtgaagacgacgagaatattgggccggtaccca
gactcgaagccgccgccagggaagacactaaagccgagcaccgtcctggccttcgctccg
ctcccgctcggcaatgttgagatggccaccgacaccatgggcctcaccgcgatgctgacc
ccctacctcctagtcattgtctcgacgacccctatcgctcagacgcaacacaaatccgcg
cgacctaaggaggttgccgcccacagccctctgacaggatgtctggcgtggttccccgga
gtcaagcttaaagtggcagaccctgttaccgggagccagatatccaaagtgaagctagtt
tactgctggtctaatgtcctcactgtcctggacgtggatgagatcccagcggaggacaaa
gacaagcctccgggtctcaagtttcgagcacggagccgatggaagtgcgaggagcccatc
gttgcggtacaatggctgagccggtcagtcctgactgtgctcaccatctcgcaaaggctt
attgtgctggaagaccggagcatgcgcatgaccgaggccatcgacctcatacacaagcac
atctaccatgtcgaccgcttttcaaaacagctgagcagcttggtggaacaactggacgag
gaggatccgtcgatgcacggtgttgttgccgacgccttttacatgagcttcaaggcgttc
aaaggccgcctcttcctcctcgggttcaacgacgtatcgattggcgccctgtccaactgg
gccgatcggctcatcgccctgatggaaaacggggactatgttggtgcgatcaaactcgca
acatcatactacagcggagacgccaacaagctcacggtcgggttgccagaagacgcagag
ctgaggcattccatggtccgggacaaactcatggagattatgagcgcatctctgaagtac
gcgttcggtcaaagacggaagaaccgggaatcagcaagcgacagccacttgcgggagcta
acccagacgtgctttgtgggctgtctaactgttggggaagtcgacttcctctttgaagag
atgtacgagtggtatgaggacgccgcggtcgagggcatcttctttgagacgctggagcct
tatattctcgacggctctgtcactgctgtgcctccggcggttgtgaaggcgatggtctct
cacttcgtcggcgcgggattggagagccggctagaggaaatgatctgccacatggacact
tcgacgctcgacttggaccagataacggtgctttgcaagcagcacagcctgtacgaggcc
ctgatctacgtttggaatcgagcaatgaacgacttcctcactccgctcttcgacttgctc
tcgctgctggtgccgctgacgcagaagggccagcactccggcggccccatgcaggctgaa
gcccgcgtggtgaatgccctcaaaatctttccctacctctcctacgtcctcaccggccgc
gtctatccgacaggcgaggaattgccagaagaagttgcgcaaaaggcaaaagcggagctc
tactggctgttcttctccgggaagagcatcacatggcccaggggcagcaataagcggctc
cttacccggcccaaccagtcgcaagaaccgtcctttccctacctgcgacttgtccttgac
ttcgacgccgcaagcttcttgagcgccctcaacgaagcgtttgaggattccttcctcaat
gactccaagtcggcgaacggcagttccaccagggacttgcccgaagaacagatgttcggg
ctgacggtagaccggcagtatatcgtctcgatcctgacggaaatcatgaactcttcggat
ttctcttccaacgagacgatctacctagacatgttcattgccaggaacttgcctaagtac
ccgcagtacctcctattcccgggttcgacgctcaccaaagtcctggttgggctgtgcagg
taccccggccaggatctggccgaggacgcccagctcagcgccgagtacctgttgtctgtg
taccagccgcccaatgtcaccgagctcatcccactcttcaaagaagccggcttctatcgc
atcctgaagcgcatctacagggtcgacaagcagtatgggaagctggtggagacctacttc
gaagaccctgaagaccaagaagctgtgttcaactgtatcgaggtctatctgcgaccgcag
gcgggtctcacacggcgccaggtgcaggatgtccaccaggttctcaagcagcactcggcc
gagtttgtcgagctcgaccctgcgatggcagccaagacgatcgctcggcacgccccagag
ctccaccaacacgtcttggactcggtggctgcgcagcctggtttgcagtatgcctacctg
aaaacgatactggaaccggaaaaggaggcagcacttggccgctcgacagatcgagacctg
gtggaactgtacctgcggctcatgtgcaagttcgatccagagcacgtctcggactacgtc
ggcctggttcagtcgtccagcctaaggctcgaacagctgctcccgacgatggaagcgact
ggtgtgattgacgccgccgtcgtcctcatggctaaggagggccaggtcaaggaagctatg
ggccggttagtcaggcatctcgaaacgctcgagtcggccctgcaggggctcctggccggg
tcgcaggatgatagttgcgacctgcaggagtctgcggaagacttgatgcaggctttgcgg
aaattcgttctcgtgggcatctggctatgtcaggagcaaaccaagactgcccgagccgcc
agctccagtcgccgaggtcagaagccacctgccgacgggagtttgtctgcaaacgagaac
ctctggctggagctgattgacgcctccgtccaaatcacaagacggctatcctcttcgctg
cagaccgcgccaaagaatgccctcccacccacaaacggtgacgccgcctaccaaccgccc
gccctcgacaccgacaagctcctcggcctcctccgctccctcgtccaaaccaccttcacc
gccctcctcacttcaacctcatccccatcaaccaccccgccgtccaccaccaccagcacc
acaaccaacctctccttcctccgcatcctgcgcgccttcctcacgcgcgcggccgcggcc
tcgcccaacctcgcggacctccgcggcgtgctgagctccgtcttcgcggcgtacgcctac
gaggagtcgatcctgcggctgtcgaaccggctgctcgagcgcagcctgttcgtgagcgtc
gcgcaggccgtcgagctgcgccagcgcgggtggcggccgcgcggcccgacgtgcgaggcg
tgcgggcgccgcgtctggggccccggcgtgcagggcgggcgggtctacgaggcgtgggag
gagaggaaggtcgctgaggagaggaggcgggcggcgattctgcgaaggcgggggggtgcg
ggtggcgttgggcttggtgctggtgctggtgaccggttgggggatgcggcggggagtgcg
gaaaggggtggcgcggaggagagggagtatgttgggaagggaaaggggaaggatgtgagt
ccgagggtgaggcaggaggaggaggaaattcaggaggggcacagaaggcaagggaagggt
aatgaggcgaagcaggacccaagagaggggttggtgggcgccggcggatcgagttctcgg
ccgccggaccagacggcgctgggtccgctggtgctgctggcgtgcaggcatatttatcac
cagagttgcctggaagcgctgttggcgaaggatgggtttgggacggagacggtataccgg
tgtcctattgatgggtag
DBGET
integrated database retrieval system
