Thermothielavioides terrestris: THITE_2123450
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Entry
THITE_2123450 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K12601
superkiller protein 8
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THITE_2123450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2123450
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
THITE_2123450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Hira
Nup160
Cytochrom_D1
eIF2A
PALB2_WD40
PQQ_3
Motif
Other DBs
NCBI-GeneID:
11523197
NCBI-ProteinID:
XP_003657596
JGI:
Thite2_2123450
UniProt:
G2RHE8
LinkDB
All DBs
Position
6:join(1084318..1084320,1084374..1084410,1084501..1085076,1085148..1085551)
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AA seq
339 aa
AA seq
DB search
MSKQYLTAHTVDEAHPAEIFSLAPTPTSILSASGSSALRVHSTTDPSFPLQQTIPAAHKL
GCHHVCTARGGLGTVAASVGFGGEIKVWTRNRAGNNDTAGEDEWRLDWELAPSSSKADGG
GDVWAVALSADEGYLACTTSDGRIHVWDIAARERIQTYETGARGGGSFAMAVDLSRDGRL
TASGHESGAVYVFNNDAGRMVYSLSGLAKPVRAVAFSPGCKRLAAAGNAGIIALYDMEHG
EHVGNLTTPSTRPAWITSLDWNDTGEYLLSGSLDGKVKVWDVARGVCVATHSETESALWS
VRWLPKTERALGPGMGKSEMFCAAGASRSLTFYREATGS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacaatacctcaccgcccacacagtggacgaagcgcacccggcagagatcttc
tccctcgcgccgacgccaacctccatcctctccgcgagcggctcgtccgcgctccgcgtg
cacagcaccaccgacccgtccttcccgctccagcaaaccatccccgccgcgcacaagctc
gggtgccaccacgtatgcaccgcgcgcggcgggctcggcaccgtggccgccagcgtcggc
ttcggcggcgagatcaaggtctggacccgcaaccgagcgggaaataacgacaccgcaggc
gaggatgagtggcgcctcgactgggagctcgccccctcctcgtccaaggccgacggcggc
ggcgacgtgtgggccgtggcgctgagcgccgacgagggctacctcgcgtgcacgaccagc
gacggccgcatccacgtgtgggacatcgcggcgcgcgagcgcatccagacgtacgagacg
ggcgcgcgcgggggcggcagcttcgccatggcggtcgatctgagccgcgacgggcggctg
acggccagcgggcacgagagtggcgcggtatatgtgttcaataatgatgccgggaggatg
gtgtattcgttgtctggtctggcaaagccggtgagggctgttgccttctcgccaggctgc
aagcgccttgccgccgctgggaacgctggcatcattgcgctgtacgacatggagcatggc
gagcacgtcggcaacctgacgacgcccagcaccaggccagcgtggatcacgtcgttggat
tggaacgacacgggcgagtacctcctgagcggatcgctcgatggcaaggtcaaggtctgg
gatgttgcccgcggtgtctgcgtggcgacgcacagcgagacggaatcggcgctgtggagt
gtgaggtggctgcccaagaccgagcgggccctggggccgggcatggggaagagcgagatg
ttttgcgcggcgggtgcgagccgcagtctgaccttctaccgggaggctacagggtcttga
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