Thermothielavioides terrestris: THITE_2123668
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Entry
THITE_2123668 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
ttt
Thermothielavioides terrestris
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ttt03041
]
THITE_2123668
Enzymes [BR:
ttt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
THITE_2123668
Spliceosome [BR:
ttt03041
]
Complex C
Other components
Complex C specific factors
THITE_2123668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
Helicase_RecD
Cas3-like_C_2
AAA_23
AAA_30
AAA_29
AAA_19
Motif
Other DBs
NCBI-GeneID:
11522998
NCBI-ProteinID:
XP_003657718
JGI:
Thite2_2123668
UniProt:
G2RHS0
LinkDB
All DBs
Position
6:join(1494023..1494244,1494317..1496098)
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AA seq
667 aa
AA seq
DB search
MSDFDLGATFIPALHKPAALLPVAKHRASLLYLIETYPVTIVVGQTGSGKSTQIPQFLEQ
AGWCADGKVIAVTQPRRVAATTVAIRVAEEFGCEVGKEVGYSIRFEDVTSESTRIKFLTD
GLLIREALVDPLLSRYSVIMVDEAHERSISSDILLGLLKKIRKKRPDLRIIISSATLQAE
DFRAFFSRSQEVTGTETNQSGDVVSIISLEGRTYPIDILYLESPAEDYLEKAISTVMDIH
TNEPKGDILVFLTGREEIDQAVQAISERSSQLPPGSQSILPLPLYAGLPADQQMYVFEEA
PENHRKVIFSTNIAEASVTIDGIVYVVDSGFVKLRAYNPKTGIETLTATPVSKASAAQRA
GRAGRTKPGKCFRLYTEEAYQSLPDANAPEIQRSNLAPFVLQLKALGIDNVLRFDFLSPP
PAELMTRALELLYSLGALDEYAKLTKPLGLRMAELAVEPMMAKTLLSAPSFGCLSEMLTI
AAMTSLGGNIWIQHEGEKKKTESAKRRFAAEEGDHITLLNAYQAFVTKGRKESRFCHDNL
LNFKALARAVSIRAQLKRYLERFGIPVDESLAAQSTSTANKAEQIQRCLTAGYFAHAARM
QPDGTFRNVSGTTVLHAHPSSVMFNRKADWVIFHEVMETGDKTFIRDITRIKKDWLLEYA
PEFYKVG
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcgacctcggggcgacgttcatcccggctctgcacaaacccgctgcgctg
ctgccagttgccaagcatcgcgcgtctcttctctacctcatcgagacatatccggtcacc
atcgtggtgggccagaccggctccggcaagagtacgcagatcccccagttcctcgagcag
gctggttggtgtgctgatggcaaggtcatcgccgtcactcagcctcgccgtgttgccgcc
acgacggtagccatcagagttgctgaggagtttgggtgcgaggtcggcaaggaggtcggc
tattcgatccgctttgaggatgtcacctcggagagcacccgcatcaaattcctcactgat
ggcctgctcatccgtgaggccctcgtggaccccctgctctcgcgctattctgtaatcatg
gtcgacgaggcccatgagcggtccattagctccgacatcctgcttggcttgctcaagaag
attcgcaagaagaggccagacctgagaatcattatcagtagcgcaacgcttcaagctgaa
gacttccgcgccttcttctcgaggtcccaggaagtgactgggacagagaccaaccagagc
ggggacgtggtgtccatcatcagcctggagggcaggacgtatccgatagacatcctctac
ctcgagtcgccggccgaggattatctcgagaaggcgatctccaccgtcatggatatccac
accaacgagcccaagggcgatattctagtctttctgaccgggcgggaggagattgatcaa
gctgtccaggccatttccgaacgttcttcccagcttcctccggggtcgcagtccatcctc
ccgcttccattgtacgccggcctaccggccgaccagcagatgtacgtgtttgaggaagcg
cccgagaaccacaggaaagtcatcttctccacaaacattgccgaggcgtcggtgacaata
gacggcattgtctatgtggtcgactctggctttgtcaagctccgggcgtacaacccgaaa
accgggatcgaaaccctaacggctacgccagtctccaaagcatctgccgcgcagcgtgct
ggccgcgctggccgcacaaaacccggcaagtgcttccggctctacaccgaagaggcttac
caatccctccctgacgccaatgctcccgaaatacagcgctcgaatcttgccccttttgtt
ctccagctcaaagccctcggcatagacaacgtcctgaggttcgacttcctcagcccccct
ccggcggagctgatgaccagggccctggaactgctctattccctcggggcgctggacgag
tatgccaaactcacgaagcccctggggctgaggatggccgagctggcagtagagccgatg
atggcgaaaacgcttctttcggctccgtcctttggttgtcttagcgaaatgttgacgata
gcagccatgaccagcctgggcggcaacatctggattcagcacgaaggcgagaagaaaaag
acagagagcgcgaagagaaggttcgccgccgaggaaggcgaccatatcactctcctgaac
gcctaccaagccttcgtgaccaagggccgcaaggagtcccgattctgccacgacaacctc
ctcaacttcaaggcgttggcacgggcggtcagcatccgggcccagctgaagcggtacctc
gagcgcttcggcatcccggtcgacgagtccctggcggcgcagtcaacctcgacggcgaat
aaggcagagcagatccagcggtgtctgaccgcgggctacttcgcacacgccgcgaggatg
cagcccgacggcacgttccggaacgtctccgggacgacggtgctccacgcccatccgagc
tccgtcatgttcaaccgcaaggcggactgggtcatcttccacgaggtgatggagacgggg
gacaagacgttcatcagggacatcacgcggatcaagaaggattggttgttggagtatgcc
ccggaattctacaaggtcggctga
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