KEGG   Thermothielavioides terrestris: THITE_2124003
Entry
THITE_2124003     CDS       T02228                                 
Name
(RefSeq) hypothetical protein
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
ttt  Thermothielavioides terrestris
Brite
KEGG Orthology (KO) [BR:ttt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ttt03009]
    THITE_2124003
   04121 Ubiquitin system [BR:ttt04121]
    THITE_2124003
Ribosome biogenesis [BR:ttt03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    THITE_2124003
Ubiquitin system [BR:ttt04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     THITE_2124003
SSDB
Motif
Pfam: WD40 Sof1 WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_SCAP ANAPC4_WD40 WD40_RFWD3 Beta-prop_DCAF12 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_Vps41 PEP5_VPS11_N Beta-prop_NUP159_NUP214 Beta-prop_IFT140_2nd NBCH_WD40 DUF3022
Other DBs
NCBI-GeneID: 11521854
NCBI-ProteinID: XP_003657860
JGI: Thite2_2124003
UniProt: G2RI62
LinkDB
Position
6:complement(join(1976277..1976576,1976653..1976784,1976838..1976955,1977010..1977019,1977071..1977160,1977215..1977579,1977632..1977735,1977791..1977866,1977919..1977945,1978005..1978117,1978205..1978210))
AA seq 446 aa
MKIKALSRSITAQQAPGSDVQRAPRNLAPELHPFERAREYQRALNAVKLERMFAKPFLGQ
LGSGHVQGIYSMCKDKNSLTTVASGSGDGVVKVWDLTTRDDETWRMAAHSNIVKGLTFTN
DKKLLSCATDGIKLWDPYNTPSDTTPIATWQEGGPYTSLSVHRAGKAFAASSGAGCIRVW
DLEQSTAAQTIQWPNFTDTITDVCFNQVETSVIGSVATDRSIILFDLRTNMPVIKTVLQF
AANRIVFNPMEAMNLAVASEDHNIYIFDARNFDRAQNIQKGHVAAVMDVEFSPTGEELVS
GSYDRTIRIWRRDQGHSRDIYHTKRMQRVFRTLWTMDSKYILSGSDDGNVRLWRANASER
SGVKSTKQRQALEYNSALLDRYSHLPEIRRIRRHRHLPKVVKKASEIKREELAAIKRREE
NERKHSNKKFQKRKSEREKAVLVKQQ
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgaagatcaaagctctcagtcggagcattacggctcagcaggcccccgggtcagacgtc
cagcgcgccccgcgaaacctcgccccggaactccacccttttgaacgagctcgagaatac
cagagagctctcaatgcggttaaattggagcgcatgttcgccaagcccttcctcggccag
ttgggcagcggccatgttcagggtatctacagcatgtgcaaagacaagaactccctgacc
acggtagcttcggggtcgggcgacggagtggtaaaagtctgggacctcacaactcgcgac
gatgagacctggcggatggctgcgcactcaaacatcgtcaagggcctgacgttcaccaac
gacaagaagctgctatcctgcgctacggacggcatcaagctatgggatccttacaataca
ccaagcgacaccacgccgattgcgacatggcaagaaggcgggccgtatacatcactgtca
gtccacagagcaggcaaggccttcgctgcctcatctggcgccgggtgcatccgcgtctgg
gatctggagcagagcacggccgcgcagacaatacagtggccaaacttcaccgacaccatc
acggacgtctgtttcaaccaggtcgagacatctgtcatcgggtctgtggccacggatcga
tctattatcctcttcgacctgcggacgaacatgcccgtgatcaagacggtgctccagttc
gccgccaaccgcattgtattcaacccaatggaagccatgaacctggctgtcgcatcagaa
gatcacaacatctacatcttcgacgctaggaattttgacagggcgcagaacatccagaag
ggccacgttgccgcagtgatggatgtcgagttttctcctaccggcgaggagctggtcagc
ggttcatatgaccgcaccatcaggatctggcgccgggaccaaggtcactcccgtgacatc
taccacaccaagcggatgcagagggtattccggacgctctggaccatggactccaagtac
atcctcagcggaagcgacgacggcaacgtccgcctgtggcgcgccaacgcgtcggagcgc
agcggcgtcaagtcgaccaagcagcggcaggcgctcgagtacaacagcgcgctgctggat
cgctactcgcacctgcccgagatccggcgcatccggcggcaccgccacctgcccaaggtg
gtcaagaaggcgagcgagatcaagcgcgaggagctggcggccatcaagcggcgcgaggag
aacgagcgcaagcactccaacaagaagttccagaagcgcaagagcgagcgggagaaggcg
gttctggtcaagcagcaataa

DBGET integrated database retrieval system