Thermothielavioides terrestris: THITE_2124200
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Entry
THITE_2124200 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
THITE_2124200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttt03021
]
THITE_2124200
Enzymes [BR:
ttt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
THITE_2124200
Transcription machinery [BR:
ttt03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
THITE_2124200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Sugar-bind
MIIP
Motif
Other DBs
NCBI-GeneID:
11523299
NCBI-ProteinID:
XP_003657941
JGI:
Thite2_2124200
UniProt:
G2RIE3
LinkDB
All DBs
Position
6:join(2243546..2243727,2243785..2244793,2244855..2245312,2245378..2245400,2245468..2248726,2248802..2248875,2248959..2249122)
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AA seq
1722 aa
AA seq
DB search
MNIAQPVASALESVEFTFLSADEIRAISVKRIENDQTFDNLKNPVPGGLYDPALGSWGDT
LCRTCNLNQAQCPGHPGHIELPVPVYHPIFMDQAYRLLRAQCVYCHRFRLPRHEIHRYTC
MLRLLQVGLLHEAQMIDAFSPSELGEQLKSMRLSDVPSAGDDEAEEEGNNVHESAIRARE
AYVRHVLQEHGLHVNLGDIRKGKHEGAAEMRRALIKEFLALMVKDKRCRSCDGISPVYRK
DRSVRIFERDLSDKEKAAMAQAGRKRSDALAISRKAKKHGDLTPDEGIADVDSSSEDSAG
ERDSEGEGEELDENGDVVMADAPAKAKPKKSKSAKPAQRFLNTMEVHKRLELLFEKEQEV
LSLLYNSKPRPRSSKPLTADMFFIRTLLVPPNRYRPEGRQGDGEVTEAQQNSLYKMIIAR
ASMVTQITREINSQTKETAEDEGRRTRDMSSLYQAWTELQDAVNSLVDRDKNPIQGAAGK
RNEEGIKQKLEKKEGLFRKNMMGKRVNFAARSVISPDPNIETNEIGVPPVFARKLTYPEP
VTSHNFKDLQQAVINGVDKWPGAAAIENENGQIINLRTKSLEDRVALANQLLAPTGNNFS
GLRNKKVHRHLTNGDVVLMNRQPTLHKPSIMGHRVRVLPGEKTIRMHYANCNTYNADFDG
DEMNMHFPQNEIARAEALQLADTDHQYISGTAGNPLRGLIQDHLSVSVALCSKDVFLDQG
DYHQLVYSALRPESGHITGERIELVPPAVIKPIPRWTGKQVITTILKNIRPADCGDLWMN
GSAKIKSRSWGEASEEGEVMFRDGEFICGILDKSQLGPSDGGFIHAVHEVYGPSVAGKLL
SGMGRLLTRYLAMVAFTCGMDDLRMTPQGEKDRKETIKAASHIGLQVAAKYVSLEEQKPT
SDDPVLLERLEEVLRDDKKQEGLELLTSQECAKLSTEITRLCLPAGLEKQFPKNHMQSMT
ISGAKGSPVNANLISCNLGQQVLEGRRVPVMVSGKTLPSFKPFDTDVRAGGYIVNRFLTG
IRPQEYYFHHMAGREGLIDTAVKTSRSGYLQRCLIKGMEGLRVSYDSSVRDSDGTVVQFL
FGEDGIDISKQKYLNDFEFVLRNLDSQLPQIRYHEPGTQALFEHKDEVIKRMKSAIRSRN
SRNPLDPVASELDPTAFAFATSEKFFSKLTEYVKTNKDGLIKEKKGPESQKGLITRKTAE
KIFAAKYLRSLVEPGEAVGIVAGQSVGEPSTQMTLNTFHLAGHSARNVTLGIPRLREILM
TASAKISTPSMTLVLNEELSEQDGERFAKSISVLPLAHVTKEAVVRERVGHGIGYALAKS
FEIRLRFFEAEEYIKMYAIDIADVLNTVEKKFIPLLCALTRKEIKKKFKEHSAATPEIGV
KVGVVETAPSGGEREDGPGNRDDDDDDDDGDDDDATSAKQRANRSEAVSYGPNDEDDDAV
QQQVQRETADDEEGEERLNFVDEAYGGSPEPEDGVGVGDKTDEFRARSREARVKNKNEHV
ARFRCDEVGGEWVEFTLEFDAGIPKILMLSLVQEAVKKSLIQQIHRLGTATFEPKKKRDE
VTGEERIVEMLVHTEGANLRAMQQYGDYINPNRISTNDIAQVLEVYGVEACRNNIVRELR
GVFSSHGIAVDPRHLNLIADYMTRNGGFTPFNRIGLTGNVSPFTKMSYETTVGFLKDAVL
DGDWDTLATPSSRLVVGKLGTVGTGSFDVLTRVPTEHKVVAF
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgcacagcccgtggcgtcggcgctggagagcgtcgagttcacgttcctgtca
gccgacgagatccgcgccatctcggtcaagcgcattgagaacgaccagacctttgacaac
ctcaagaacccggtgcccgggggcctctacgaccccgcccttgggtcgtggggcgacact
ctatgccgaacatgtaatctgaaccaggcacagtgccccgggcatccggggcacatcgaa
ctcccagtgcccgtgtaccaccccatcttcatggaccaagcctaccgtctcctccgtgct
cagtgtgtctactgccaccgtttccgtctgccgcgccacgaaatccaccggtacacttgc
atgcttcggctcttgcaagtcggcctccttcacgaagcccagatgatcgatgcgttttcc
cccagcgagcttggggagcaactcaagagcatgaggttaagcgacgtgccctcggcgggc
gatgacgaggcagaggaggagggaaacaacgtgcatgagagcgccatccgtgcccgggag
gcgtatgtgcgccacgtcttgcaggagcacgggctgcatgtcaacctcggcgacatacga
aaaggcaaacacgagggtgctgccgagatgaggcgagccttgatcaaggagttcctcgcc
ctgatggtcaaggacaagcggtgcagaagctgcgacggcatctcccccgtctaccgcaaa
gaccgctcggtcaggatcttcgaacgtgacctgagcgacaaggaaaaggcggcaatggcg
caggccgggaggaagcgcagcgatgctcttgcgatcagtaggaaggccaagaagcacggc
gatctcactcccgatgagggaatcgccgacgtggactcgtcgtccgaggactcggcaggg
gagcgcgacagcgaaggcgagggagaggagctcgacgagaacggggatgtggtcatggca
gatgccccggccaaagccaagccgaaaaagtccaagtccgcaaaacccgcgcagcggttc
ctcaacaccatggaggttcacaagcgcctcgagttgctcttcgagaaggagcaggaggtg
ctttccttgctctataactcaaaaccccggcccaggagctctaaaccactcaccgccgat
atgttcttcattcggacccttctagtccccccaaatcgctatcgtccagagggccgccaa
ggtgatggcgaggtcaccgaagcgcaacaaaacagcctctacaagatgatcatcgctcgt
gcttcgatggtcacacagatcacgcgagagatcaacagccagaccaaagagacggctgag
gacgaaggcaggagaacgagagatatgagttcgctctatcaggcctggacggaattgcaa
gacgctgtcaactcgctggtcgaccgcgacaagaatccgatccaaggtgcggctggcaag
cggaacgaggaagggatcaaacagaagctggagaagaaggagggcctgttccggaagaac
atgatgggcaagcgggtcaacttcgctgccagaagcgtcatctcgccggatccaaacatc
gagactaacgaaatcggtgtccctcctgttttcgccaggaaactcacgtatcccgaacca
gtgaccagccacaacttcaaggatcttcaacaagctgtcatcaacggcgttgacaagtgg
ccgggtgcggcggccattgaaaacgagaatggccagatcatcaatctcaggacgaaatcc
ctggaggaccgcgtggctctggctaatcaacttcttgctcccacggggaacaacttcagc
ggcctgcggaacaagaaggtgcatcgacatctgacaaacggcgatgtagtcttgatgaac
cggcaaccaacattgcacaagccctccatcatgggccaccgagttcgagtcctgcctggg
gagaagaccatccgcatgcactacgccaactgcaacacgtacaatgccgacttcgacggt
gacgagatgaacatgcatttcccccagaacgagattgcgcgcgccgaagctctccagttg
gccgatacggaccatcaatacatctccgggacggccgggaacccactgcgcggtctgatt
caggatcacttgtcggtctccgtggcgctctgcagcaaggacgtgttccttgaccagggc
gactaccaccaactcgtctacagcgccctccggccagagagcggccacatcacgggcgag
aggatcgagctcgtgcccccagctgtgatcaagccgataccgcgctggacaggcaagcag
gtcatcacgacgatcctgaaaaacattaggccagccgactgcggcgacctgtggatgaac
ggatccgccaagatcaagagccgaagctggggcgaggcgtcggaagagggcgaggtgatg
ttccgcgatggcgagttcatctgcggcattctcgacaagtcgcagctgggtcccagcgac
ggggggttcatccatgcggtgcacgaggtctacggcccgtccgtggcggggaagctcctc
agcggcatgggtcggcttctgacgcgctacctggccatggttgccttcacctgcggtatg
gacgatcttcgcatgacaccgcagggagagaaagaccggaaggagaccattaaggccgcg
tcgcatatcggtctccaggtggcggccaagtatgtctcgctggaggagcagaagcctacc
agtgacgatcccgtgctgctagagcgcctggaagaggtcctcagagacgacaagaagcag
gagggcctggagttgctcactagtcaggagtgcgccaagctgtccaccgagatcaccagg
ctatgcctgcctgctggcctcgagaagcagtttcccaagaaccacatgcagtccatgacc
atctcgggtgccaagggttctcccgtcaacgccaacctgatttcgtgcaacctcggccag
caggtcctggaaggccgccgcgtccccgtcatggtgagcggcaagaccttgccaagcttc
aagcccttcgacaccgacgtgagggcgggtggttacattgttaaccgcttcttgacgggc
attcgcccgcaggagtattatttccatcacatggccggtcgcgagggtctgatcgatacg
gccgtcaagacatctcggtccggctaccttcagcggtgcttgatcaagggcatggagggc
ttgcgagtctcatacgactcctcggtcagggactcggacggcactgtcgtgcagttcttg
ttcggagaggacggcatcgacatttcgaaacagaagtatcttaacgactttgaatttgtc
ctgcgcaacctcgactcgcaattgccacagatccggtatcatgagcctggcactcaagct
ctgtttgagcacaaggacgaggtcatcaagcggatgaagagcgccatccggtcaagaaac
agccgcaatcctcttgacccggtagcatccgagctcgaccccaccgcctttgcctttgcg
acctcggagaagttcttcagcaagctgacggagtacgtcaagacaaataaggacggactg
atcaaggagaagaaggggccagaaagccagaagggtctgatcacccgcaagacggccgag
aagatcttcgcggccaagtacttgcggtcgctagttgagcccggcgaggctgttggcatt
gtcgctggccagtctgtcggagagccgtcgacgcagatgacgcttaacacattccacttg
gcgggacactcggccaggaacgtgacgctcggtatcccgcgtctccgcgagatcctgatg
acggccagcgccaagatctcgacgccatccatgactctcgtcctcaacgaggaactctca
gagcaggacggcgagcggttcgccaagtccatcagcgtgctcccgcttgcgcacgtcacc
aaggaggcggtcgtccgggagcgcgtcggccacggcatcgggtatgccctggccaagtcg
ttcgagatccggctgcgcttcttcgaggccgaggagtacatcaagatgtatgctattgac
attgctgatgtcctcaacacggtggagaagaagttcatcccgctgctgtgtgcgctcacg
aggaaggagatcaagaagaaattcaaggagcacagcgcggccacgcccgagatcggcgtc
aaggttggcgtcgtggagacggcgccgagcgggggcgaaagggaagatggtcccggcaac
cgggacgacgacgatgacgacgacgacggcgatgatgacgacgccacgagcgcgaaacag
cgagccaacaggagcgaagcggtctcgtacggcccgaacgacgaggatgacgacgccgtt
cagcaacaggtccagcgcgagacagccgacgacgaagagggcgaggagcggctcaacttc
gtcgacgaggcgtacggcggcagccccgagcccgaagacggtgtcggcgtcggcgacaag
acggacgagttccgggcgcggtcacgcgaggcgcgcgtgaagaacaagaacgagcacgtg
gcgcgcttccggtgcgacgaggtgggcggcgagtgggttgagttcacgctcgagtttgac
gcggggatccccaagatcctcatgctcagcctagtccaggaggcggttaagaagtctctc
atccagcagatccaccggctcggcaccgccacgttcgagcctaagaagaagagggacgag
gtgacgggcgaggagcgcatagtcgagatgctggtgcacaccgagggcgccaacttgcgg
gccatgcagcaatacggcgactacatcaaccccaaccgcatctcgaccaacgacatcgcg
caggtgctcgaggtgtacggcgttgaggcgtgccgcaacaacatcgtgcgcgagctcagg
ggcgtcttcagctcgcacggcatcgccgtcgacccgcgccatctgaatctcattgccgac
tacatgacgagaaacggcggcttcacgccgttcaaccggatcggcctgacgggcaacgta
agccctttcaccaagatgagctacgaaacgaccgttggcttcctcaaggatgccgtcctc
gacggcgactgggacaccctggccacgccgtccagcaggctggtggtcggcaagctgggc
acggtcggcaccggctcgttcgacgtgctgacgagggtgccgaccgagcacaaggtggtt
gctttttaa
DBGET
integrated database retrieval system
