Thermothielavioides terrestris: THITE_2124823
Help
Entry
THITE_2124823 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03030
DNA replication
ttt03410
Base excision repair
ttt03420
Nucleotide excision repair
ttt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THITE_2124823
03410 Base excision repair
THITE_2124823
03420 Nucleotide excision repair
THITE_2124823
03430 Mismatch repair
THITE_2124823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttt03032
]
THITE_2124823
03036 Chromosome and associated proteins [BR:
ttt03036
]
THITE_2124823
03400 DNA repair and recombination proteins [BR:
ttt03400
]
THITE_2124823
DNA replication proteins [BR:
ttt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
THITE_2124823
DNA Replication Termination Factors
ELG1-RFC complex
THITE_2124823
Chromosome and associated proteins [BR:
ttt03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
THITE_2124823
DNA repair and recombination proteins [BR:
ttt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
THITE_2124823
Check point factors
HRAD17(Rad24)-RFC complex
THITE_2124823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_30
RCF1-5-like_lid
AAA_22
AAA_16
AAA_11
AAA_24
DUF815
ResIII
AAA_5
AAA_3
AAA_19
RuvB_N
AAA_28
AAA_14
PhoH
SLFN-g3_helicase
DEAD
AAA_18
AAA_7
DNAX_ATPase_lid
Mg_chelatase
ATPase_2
RNA_helicase
DO-GTPase1
bpMoxR
VTC
Motif
Other DBs
NCBI-GeneID:
11523373
NCBI-ProteinID:
XP_003658263
JGI:
Thite2_2124823
UniProt:
G2RGU2
LinkDB
All DBs
Position
6:complement(join(3409909..3410300,3410385..3411028,3411105..3411238))
Genome browser
AA seq
389 aa
AA seq
DB search
MSDFDDEMDIDVPPSKDITFSSDTAAKGKRSAANLPVEAEDSLPWVEKYRPVSLSDVSGH
QDILATINKFVDSNRLPHLLFYGPPGTGKTSTILALARRIYGHQNMRQMVLELNASDDRG
IEVVREHIKTFASTKQIFTAGSSASRAGIAGFKLIILDEADAMTNTAQMALRRIMEKYTA
NTRFCIIANYAHKLSPALLSRCTRFRFSPLHEQDIRVLVDKVIEEEGVKIMPDAVDSLVR
LSKGDMRRALNVLQACHASSTPLQPRDGPKIPEQDIVRETITTETIYNCVAAPPPDAIKK
ILSTLLSTSDVTSCLSTINTLKAAQGLALADIITALSEELVKLEVKPQVMITWLETLADV
EHRVSSGASEAIQTAAVVGAVRNGVELMG
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacttcgacgacgagatggacatcgatgtcccgccgtccaaggacatcaccttc
tcatccgacaccgcggccaagggcaagcgcagcgccgcgaacctgcccgtcgaggccgag
gacagcctgccatgggttgagaagtaccgccccgtctcgctgtccgacgtctcgggccac
caggacatcctcgccaccatcaacaagttcgtcgactcgaaccggctcccccacctcctc
ttctacgggccccccggcaccggcaagacgtccaccatcctcgccctcgcgcgccgcatc
tacgggcaccaaaacatgcgccagatggtgctggagctcaacgcgtccgacgaccgcggc
atcgaggtcgtgcgcgagcacatcaagaccttcgcctccaccaagcagatcttcaccgct
ggctcgtcggcctcgcgggcgggcatcgccgggttcaagctcatcatcctcgacgaggcc
gacgccatgaccaacactgcgcagatggcgctccgccgcatcatggagaagtacacggcc
aacacgcgcttctgcatcatcgccaactacgcccacaagctcagccccgccctgctgtcg
cggtgcacgcgcttccgcttcagcccgctgcatgagcaggacatccgcgtcctggtggac
aaggtgatcgaggaggagggcgtcaagatcatgcccgacgccgtggactcgctggtgcgg
ctaagcaagggcgacatgcgccgcgcgctgaacgtgttgcaggcgtgtcacgcatccagc
acgccgctccaacctcgcgacggccccaagatccccgaacaggacatcgtccgcgagacc
atcacaacagagaccatctacaactgcgtggcagcgccgccgccggacgccatcaagaag
atcctcagcacgctactgagcacgagcgacgtcacgtcctgcctgtcgaccatcaacacg
ctcaaggcggcgcaggggctggcgctggccgacatcatcaccgcgctgtcggaggagctg
gtcaagctggaggtgaagccgcaggtcatgatcacgtggctggagacgctggccgacgtg
gagcacagggtgtcgagcggcgcgagcgaggcgatacagacggcggcggtggtcggggcg
gtgcggaacggagtggagttgatgggctga
DBGET
integrated database retrieval system
