Thermothielavioides terrestris: THITE_2145375
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Entry
THITE_2145375 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K15172
transcription elongation factor SPT5
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
THITE_2145375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttt03021
]
THITE_2145375
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2145375
Transcription machinery [BR:
ttt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
THITE_2145375
RNA polymerase I system
THITE_2145375
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
THITE_2145375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
Spt5_N
KOW5_SPT5
KOWx_SPT5
KOW4_SPT5
CTD
KOW2_Spt5
KOW1_SPT5
KOW
DUF3912
Motif
Other DBs
NCBI-GeneID:
11516518
NCBI-ProteinID:
XP_003654495
JGI:
Thite2_2145375
UniProt:
G2R8A0
LinkDB
All DBs
Position
3:complement(join(3173302..3173933,3173995..3176224,3176332..3176700))
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AA seq
1076 aa
AA seq
DB search
MALANGPFQFAADSESEDDNFNPAPADLSDEENDDESGQRATDKGAQRASSPAAQKDGNN
EDEDEERPPSKSPLKRPREEDEEDDENGDEEEVEEDGDGGNGDDEEDEEEEEEEDEEDED
VQHRHRRKRRKDHRAAFFDIEAEVEDEDEAEEDEKEGEEIEDFIDNAHPDDIADSGHLED
DRRHRELDRRRELEASMDAEKQAEILRARYGKRAPARGYGEMTVVPKRLLLPSVDDPGIW
AVRCKEGKEREVVFSIMRRMEERLNSRGDAPITAAFERAGPNSVMKGYIYVEARRQNDVM
IALDGILNVYPRTKMMLVEIKDMPDLLRVTKTPNLEPGAWVRLKKPAKHAGDLAQVLDVT
ENGLEARVRFIPRLDYGVRDDALSSLTPDGKRKRPGMPGPRPPQRLFSEVEARKRHPRHI
QGNPQTNTWTYMGEDFENGFQVKDIKIQHLEVKDVNPTLEEVTKFASGSEDGTENLDLKA
LAASLKDNNVTYVPGDVIEVFEGEQRGVVGRVTNVQGDIVTLKVTEGDLAGQTIEVPNKG
LRKRFRTGDHVKVIGGSRFRDEVGMIVKIVEDRVTLVTDQTNTEITVFSKDLREASDIGG
QGSLGQYSLLDLVQLDPTTVGCIVKVDRESMVVLDQNGETRQVLPSQIANKLPKRRTAVA
ADRNGSEIRLDDVVREYGGQQRQGKIIHIHRSFVFLHSNATTENAGVFVTRAGNVTTIAA
KGGRINNANTGPDLSTMNPALKRNPAGNNNMPPPKSFGPDRAINQTVSIRRGGYKGLMGI
VKDTTDSHARVELHGRNKIITVPKADLIFRDKVTGKPIDIYSRSGRGGFGAPARGGFGGP
GEWSGGSRTPMGAGGGERTPAWGSSKSIARTPAWGRAETSGSRTPAWGDGSRTVNPYDGN
RTAYGGATAYGGSRTPAWSSSAKTPAHDGFGHGSKTPAYGAGGSDPWGSKTPAYGVSAPT
PGASGADSWGYTPGPSGGSHAFDAPTPGAGLGAPTPAALNAPTPGAYSAPTPAAISAPTP
GAWQGGWGADAAPTPAVGAPTPAASGGYYGAPTPAAYGGAPETPAASAEIRYAEDD
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggcaaacggccccttccaatttgcggccgactccgagtcggaggacgacaac
ttcaaccccgcacccgccgacctttccgacgaggaaaacgacgatgaatccggccagcgc
gccactgacaagggcgcccaacgcgcaagcagccccgctgcccagaaggatggaaacaac
gaggacgaggatgaagagcgacccccctccaagagcccgttgaaacggcctcgcgaggaa
gatgaggaagatgatgagaacggggacgaggaggaagtagaagaagatggcgacggcgga
aacggtgatgatgaagaggatgaagaagaagaggaagaggaggatgaagaggacgaggac
gttcagcatcgccatcgccgcaagcgccggaaggatcaccgcgccgctttcttcgatatc
gaagccgaagtcgaagatgaggacgaagccgaagaagacgagaaagagggcgaagaaatt
gaagattttattgacaacgcccaccccgatgacattgccgacagcgggcatctcgaggat
gataggagacaccgcgagctcgaccgtcgccgtgagctcgaggccagcatggatgcggag
aaacaagccgagattctgcgcgcgcggtacggcaagcgggctcccgctcgaggttacgga
gaaatgactgtcgtgcccaagcgcctgctcctgcctagcgtggacgatcccggcatttgg
gctgtcaggtgcaaggaaggcaaggaacgggaagtcgtcttctccatcatgcgtcgcatg
gaggagcggcttaacagccggggcgatgcgcccatcacggccgcctttgagcgtgctggc
cccaactcagtcatgaagggatacatctacgtcgaggcgcgccggcagaacgacgtcatg
atagccctggacggcatcctcaacgtgtacccgcggaccaagatgatgctcgttgaaatc
aaggacatgccggatctcttgcgggtcaccaagacgccgaacttggagcccggcgcttgg
gtgcgactcaagaagccggcaaagcacgctggtgaccttgctcaagtcctcgacgtgacc
gagaacggtctggaggcccgagtgcgcttcattcccagactggactacggtgtccgcgac
gacgcgctgtcgtcgcttaccccagacggtaagcgcaagcgtccgggaatgccgggcccg
cgcccgccccagcggcttttcagcgaagtcgaagcgagaaagagacacccccgccatatt
cagggcaatccgcagaccaacacttggacctacatgggcgaggacttcgagaacggcttc
caggtcaaggacatcaagattcaacacttggaggttaaggacgtaaatccaacgctggaa
gaggtcaccaagttcgccagcggctccgaggacggcaccgaaaaccttgacctcaaggcc
ctcgctgccagcctgaaggataacaacgtcacctacgtccccggggatgtcatcgaagtg
ttcgagggcgaacaacgaggcgttgtcggcagggtaacgaatgtgcagggtgatatcgtc
acgctcaaggtcacggagggcgatctggctggccaaacgatcgaggttcccaacaagggc
ctgcgcaagcgcttcaggaccggtgaccacgtcaaggtcatcggcggcagccgcttccgg
gacgaagtcggtatgatcgtcaagatcgtcgaggaccgcgtcactctcgtgacagaccag
accaacacggaaatcaccgtgttcagcaaagacctgcgcgaggcgagcgacatcggcggc
cagggttccctcggccaatactcgctgcttgacctggtgcagctcgaccccaccactgtc
ggttgcatcgttaaagtcgatcgcgagtcgatggtcgtcttggatcagaatggcgagacc
aggcaggtgttgccttcgcagatcgcgaacaagctgcccaagcggagaaccgcagtcgct
gccgatcgcaacggctccgagatccggctggacgacgttgtccgcgagtacggcggacag
cagcgccagggcaagatcatccacatccaccggtccttcgtcttcctccacagcaatgcc
accacggaaaatgccggagtcttcgtcacgagagctggcaacgtcacgaccatcgccgcg
aagggcggccgcatcaacaacgcgaacacgggccccgatctgagcacaatgaatcccgcc
ctcaagcgcaacccggccgggaacaacaacatgccgccacccaagagcttcggacccgat
cgcgccatcaaccagaccgtgagtatccggagaggcggctacaagggcttgatgggcatc
gtcaaggacaccaccgactcgcacgcgcgcgtcgaactccacggcagaaacaagatcatc
accgttcccaaggcggacctgatattcagggacaaggtcaccgggaagccgatcgacatc
tacagccgctctggacggggtggctttggcgcccccgcccggggtgggttcggcggacct
ggcgagtggtcgggaggaagcaggacgcccatgggagcagggggaggggagcgcactcct
gcctggggttcctcgaagtcaattgcgcgcacaccggcttggggccgtgccgagacatcc
ggctcacgcacgcccgcctggggcgacggatcccggaccgtcaacccttacgacgggaac
cgcacggcctacggaggcgccacagcctacggcggctcccgcactccggcgtggtcctcg
agcgccaagacccccgctcacgacggcttcggccacggctcgaagacacccgcctacggc
gccggcggcagcgacccttggggttccaagacgcccgcctacggcgtctcggcacccacc
cctggcgccagcggcgccgacagttggggctacacgccgggcccgagcggcggatcccac
gcgttcgacgcgcccacgccgggcgccggtctcggcgcgcccacccccgccgccctcaac
gccccgaccccgggcgcctactcggcgcccacgcccgccgccatcagcgcgccgacgccc
ggcgcctggcagggcggctggggcgcggatgcggcgccgaccccggccgtgggcgcgccg
acccccgccgctagcggtgggtactatggcgcgccgacgccggcggcgtatggcggtgcg
cccgagactcctgccgcgtcggcggagattcggtatgccgaggacgattga
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