Thermothielavioides terrestris: THITE_2170336
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Entry
THITE_2170336 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K03124
transcription initiation factor TFIIB
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
THITE_2170336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttt03021
]
THITE_2170336
Transcription machinery [BR:
ttt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
THITE_2170336
Prokaryotic type
Archaeal type
TFB
THITE_2170336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
RB_B
Motif
Other DBs
NCBI-GeneID:
11521010
NCBI-ProteinID:
XP_003652947
JGI:
Thite2_2170336
UniProt:
G2R227
LinkDB
All DBs
Position
2:6307126..6308175
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AA seq
349 aa
AA seq
DB search
MANSFAAFDDTAKGAEFKEDLNVILMCPDCKESPPNLVEETSSGDVVCASCGLVLGERII
DSRSEWRTFSNDDQGNDDPSRVGEGPNLMIDGDQLQTAIAYDGKNAKNLAHLQNKINQDK
GSKALMAAYRDIQSLTDSINAGAQVANAAKHIFKMVEDNKALKGKSQEAIIAGCIFIACR
QTGVPRTFREIYGLTKVSKKEIGRVFKQLEVFLQKMGGEDAIAQASLFNQVYMAKGSTSA
VELCARYCSNLHFRNPVSVENIARRLADKSTQVSDLAGRSPLSVAAACIYMASHIVGEPR
NPRQISEVSGVSDGTVKTAYRYLYAARDTFLTEEIFPEGVPDADKLPAN
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattcgttcgctgccttcgacgacacggccaagggtgccgagttcaaggaggat
ctcaacgtcatcctcatgtgccccgattgcaaggagagcccgcccaatctggtcgaagag
acctcctcgggcgacgtggtctgcgcctcgtgcggcctggtcctcggcgagcgcatcatt
gacagtcggtccgagtggcgtaccttctccaacgacgaccaagggaacgacgacccttcg
cgtgtcggtgaaggcccgaacctcatgatcgacggcgatcagctccagaccgcgatcgcc
tacgacggcaagaacgccaagaacctagctcacctgcagaacaagatcaaccaagataag
ggctccaaggcgctcatggcagcgtaccgggacatccagagcctgacggacagcatcaac
gccggcgcgcaggtggccaacgcagccaagcacatcttcaagatggtcgaggacaacaag
gccttgaagggcaagtcgcaagaggccatcatcgccggctgcatcttcatcgcctgccgc
cagacgggcgtgccgcgcaccttccgtgaaatctatgggctcacgaaggtgtccaagaag
gagatcggccgtgtcttcaagcagctcgaggtgttcctgcagaagatgggcggcgaggac
gccatcgcccaggccagcctcttcaatcaagtgtacatggccaagggctccaccagtgcg
gtcgagctgtgtgcccgctactgcagcaacctccacttccgcaatcccgtcagcgtcgag
aacatcgcccgccgccttgccgacaagtcgacccaagtgtccgatctggccggccgctcc
ccgctctcggtcgccgcggcgtgcatttacatggcgtcgcacatcgtgggcgagcctcga
aaccctagacagatctccgaagtctcgggcgtcagcgacggcacggtcaagacagcctac
cgctacctctacgcagcgcgcgacacattcctgaccgaggaaatctttccggagggtgtc
ccggacgccgacaaactgcccgctaactag
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