Thermothielavioides terrestris: THITE_34523
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Entry
THITE_34523 CDS
T02228
Name
(RefSeq) polysaccharide lyase family 4 protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ttt
Thermothielavioides terrestris
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
THITE_34523
Enzymes [BR:
ttt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
THITE_34523
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Gene cluster
GFIT
Motif
Pfam:
fn3_3
CBM-like
PPC
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
11517161
NCBI-ProteinID:
XP_003651267
JGI:
Thite2_34523
UniProt:
G2R1V5
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Position
2:join(447277..447477,447514..449129,449196..449409)
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AA seq
676 aa
AA seq
DB search
MRLNSVLGGLLALSSSSLVSAFLTVNETSHSVEIANDRLVFSVNKSIGAIDVLTLDGQDL
LGSRASAFGIGPYLDCYCVPSGSYTPGSIDPTYKVFQGVDASHVKYGGVVMSEVYPPTGQ
LLEQYWFLRDGETGLHTFSRIAYHNSTTPFLRNLQEFRTLFRPSTNIWTHLITDDQLWAP
LPVPNPASGSTANSTTVQDATWYLGNRTGDPYVEQFSDYFTKYTFAAVWRDHTVHGMFAD
GSYIDDKSTFGAWLVMNTKDTYFGGPLHSDLVVDGIVYNYLVSNHHGDGTPNITDGFDRT
FGPQYYHFNKGPAGGSWQALRDEAVKFASPSWNAAFYDSIAQHVPNYVPTGGRGSWKAQI
ALPKGAKNAIAVLAQDGVDFQDNVFDTTAYQYWADIESSSGKVQIDRIKAGTYRLTVYAD
GIFGDYVHDGIVVKAGKTTDSGRLVWSAESAGRELWRIGTPDKSAGEWRHGDVRDAQHPL
HPPEYRIYFGAYDFIDDFPNGVRFHVGTSDEAKDFNYIHWSVFGGYANFLRPVQVEGHGE
INNWTITFDLKEEQLRHTSLATFTIQLAGAKTAAGNTDVFNATQEYNNLPFVVVVNGHEL
EPWIIPYYQSSSCGVRSGVVCYQVSHKFTFPTAYLTAGEATNEIILSLPYNATDYESALL
PRSVYVQYDALRLEVK
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcaattcagtccttgggggccttttggctctctcctcctcctcgctcgtctcc
gcattcttgacggtcaatgagacttcccactctgtggagatcgcgaacgacaggcttgtc
ttctccgtcaacaagtctatcggcgcgatcgacgtcctcacattggatggccaagacttg
ctcggtagcagagccagcgcgtttggtatcggaccgtaccttgactgctattgcgtcccg
tccggctcgtacacccctggttcgatcgacccgacctacaaagtcttccagggagtcgac
gcatcccatgtcaagtacggcggtgtcgtcatgagcgaggtctacccgcccaccggccag
cttttggagcaatactggttcctgcgcgacggggaaacggggttgcataccttcagtcgg
atcgcataccacaactccaccacgccgtttctgcgcaacctccaggagttccggactctg
ttccgccccagcacgaacatctggacacacctgattacggacgaccaactgtgggcgccg
ctgcccgtgcccaacccagcgtcagggagcacagcaaactcgacaaccgtccaggatgcc
acttggtacttgggcaaccgcaccggagatccgtacgtcgagcagttctccgactatttc
accaagtacacgtttgcagccgtttggcgggatcacacagtccacggcatgttcgccgac
ggatcttacatcgatgacaagtcgacgttcggagcctggctcgtgatgaacaccaaggac
acctacttcggcgggcccctccattcggatctggtggttgacggcatcgtctacaactac
ctcgtctcgaaccatcacggcgacggcacgcccaacatcaccgacggcttcgaccgcacg
tttggtcctcagtactaccatttcaacaaggggcccgcaggtggatcgtggcaggccctt
cgggacgaggccgtcaagttcgcatcgccgtcatggaacgccgcgttctacgactccatc
gcccagcacgtgccgaactacgtgcccacgggggggcgagggtcttggaaggctcagatc
gcgttgccgaagggagcgaagaacgcaattgccgtcctggctcaagacggcgtcgacttc
caggacaatgtcttcgacaccacggcgtatcagtactgggcagacatcgagtcgagcagc
gggaaagtccagatcgaccggatcaaggcgggcacataccggctgaccgtgtacgccgac
ggcattttcggcgattacgttcatgacgggatcgtggtgaaggccggcaagaccaccgac
agcggccgcctggtgtggtcagccgaatccgcgggacgcgagctctggcgcatcgggacc
ccggacaagtcagccggtgagtggaggcacggcgacgtgcgagacgcgcagcaccctctc
catcctcccgagtaccgcatctacttcggcgcatacgacttcatcgacgatttccccaac
ggcgtgcgcttccacgtgggcacgagcgacgaagccaaggacttcaactacatccactgg
tccgtcttcggcggctacgcaaactttctccgaccagtgcaggtcgagggccacggcgag
atcaacaactggaccatcacgttcgacctcaaggaggagcagctccgccacaccagcctg
gccacctttaccatccagctggccggcgcgaagacggcggctggaaacacggatgtgttc
aacgcgacccaagaatacaataacctgccctttgtcgtcgttgtcaacgggcatgaactg
gaaccgtggattatcccatactatcagtcctcgtcctgcggcgttcgcagcggcgtggtc
tgctatcaggtgtctcacaagttcacgttcccgacggcatatttgacggctggggaggcc
acgaatgagatcatcttgagtctgccgtacaacgcgactgattacgagagtgcgctgttg
ccgaggagtgtctacgtgcagtacgacgcactgaggctggaagtaaagtag
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