Thermothielavioides terrestris: THITE_41253
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Entry
THITE_41253 CDS
T02228
Name
(RefSeq) subunit C of CAF1 complex-like protein
KO
K10752
histone-binding protein RBBP4
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03082
ATP-dependent chromatin remodeling
ttt03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
THITE_41253
03083 Polycomb repressive complex
THITE_41253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ttt03036
]
THITE_41253
Chromosome and associated proteins [BR:
ttt03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
THITE_41253
Histone modification proteins
HAT complexes
HATB complex
THITE_41253
HDAC complexes
Sin3A-HDAC complex
THITE_41253
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
THITE_41253
PRC2.2
THITE_41253
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
THITE_41253
Heterochromatin formation proteins
Other heterochromatin formation proteins
THITE_41253
Chromatin remodeling factors
NuRD complex
THITE_41253
NuRF complex
THITE_41253
NuRF complex (fruit fly)
THITE_41253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
Beta-prop_EIPR1
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD40_RFWD3
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_TEP1_C
MIOS_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
11523615
NCBI-ProteinID:
XP_003649200
JGI:
Thite2_41253
UniProt:
G2QUB2
LinkDB
All DBs
Position
1:complement(join(2570094..2570760,2570825..2571343,2571398..2571449,2571499..2571547))
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AA seq
428 aa
AA seq
DB search
MDDQDDAVMEQRLINEEYKTWKKNSPFLYDMILSTALEWPTLTTQWFPDVKDVKDRNYTV
HRLLIGTHTAEGKPNHLQIAELEIPKFVQPNPRDYDEERGEIGGYGAKGSSGEPPVIKFN
ITQKIDHPGEVNKARYQPQNPDIIATLAVDGKVLIFDRTKHSLTPTGTPNPQIELVGHKA
EGFGLAWNPHEEGCLASGSEDNTMMLWDLKTIQGSGKTLKPWRKYTHHSHIVNDVQYHPL
VKHWIGTVSDDLTLAIIDVRNPTTTKAAVVARDGHSDAINALSFNPRHEILIATASADKT
IGIWDMRNLKQKIHTLEGHNDAVTSLAWHPTETSILGSGGYDRRVLFWDVSRIGDEQLPE
DEEDGPPELLFMHGGHTNHLADFSWNLNDPWLVCSAAEDNLLQIWKVADAIVNPADFDLP
MNEMDASN
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccaggatgatgccgtcatggagcagaggctcatcaatgaagagtacaagacg
tggaagaagaacagcccgttcctctacgacatgatcttaagtacggcgctggagtggccg
accctgacgacgcagtggtttcccgatgtcaaggacgtcaaggacagaaactacacggtg
cacagactgctcatcggcacccacactgctgagggcaaacccaaccatcttcagattgcc
gagctcgagattccgaaattcgtccaacctaacccccgcgactacgacgaggagcggggc
gagattggcggctacggcgccaaggggtcgtccggggagccgcctgtcatcaagttcaac
atcacccagaagattgaccacccgggcgaggtcaacaaggcgcggtatcagcctcagaac
cccgacatcatcgccaccctcgctgttgacggcaaggtcttgatctttgaccgcactaaa
cacagtctgacacccacgggcacgccgaacccccagatcgagttggtcggccacaaggcg
gaaggtttcggcctggcatggaatccgcacgaggagggctgtcttgcgtccggcagcgag
gacaacaccatgatgctctgggatctgaagacaatacagggctcgggcaagacgctgaag
ccgtggcgcaagtatacgcaccacagccacatcgtcaacgacgtgcaataccaccctctg
gtcaaacactggattggcaccgtgtccgacgacctgacactcgccatcatcgatgtgcgc
aacccgactaccacgaaagcggctgtcgtcgcccgcgatgggcacagcgacgcaatcaac
gcgctgtcgttcaacccgcggcacgagatcctcatcgccacggcatcggccgacaagaca
atcggcatctgggacatgcgcaacctcaagcagaagatccacacgcttgagggccacaac
gatgccgtcacgtcgctcgcgtggcaccctaccgagaccagcatcttgggtagcggaggc
tacgataggcgggttctcttctgggatgtcagccgtattggcgacgagcagctgccggag
gacgaggaggacggcccgccggagctgctcttcatgcatggcgggcacaccaaccacctt
gccgacttcagctggaacctcaacgacccctggcttgtgtgcagcgcggccgaggacaat
ctcctccagatctggaaggtagcagacgcgatcgtcaacccggctgacttcgacctgccg
atgaacgaaatggacgcgtccaattag
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