KEGG   Thermothielavioides terrestris: THITE_43396
Entry
THITE_43396       CDS       T02228                                 
Name
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
ttt  Thermothielavioides terrestris
Pathway
ttt03030  DNA replication
ttt03410  Base excision repair
ttt03420  Nucleotide excision repair
ttt03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ttt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    THITE_43396
   03410 Base excision repair
    THITE_43396
   03420 Nucleotide excision repair
    THITE_43396
   03430 Mismatch repair
    THITE_43396
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ttt03032]
    THITE_43396
   03400 DNA repair and recombination proteins [BR:ttt03400]
    THITE_43396
Enzymes [BR:ttt01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     THITE_43396
    6.5.1.6  DNA ligase (ATP or NAD+)
     THITE_43396
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     THITE_43396
DNA replication proteins [BR:ttt03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    THITE_43396
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     THITE_43396
DNA repair and recombination proteins [BR:ttt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     THITE_43396
   NER (nucleotide excision repair)
    Other NER factors
     THITE_43396
   MMR (mismatch excision repair)
    Other MMR factors
     THITE_43396
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase MctB PNKP_ligase
Other DBs
NCBI-GeneID: 11520168
NCBI-ProteinID: XP_003655787
JGI: Thite2_43396
UniProt: G2R901
LinkDB
Position
4:join(3250873..3251816,3251871..3252639,3252703..3253239)
AA seq 749 aa
MEDAPEPEAPKARAAPSKPQSSRNKEPEPVPAVKTEAEEDTPESASEVEEEELQDEEEKP
EVAAKARQTVQASLNSDVKHPYPDWKAGEPVPYAALCKTFSLIELTTKRLEILAHCSLFL
RQVMRLTPDDLLPTVLLMVNKLAPDYAGIELGIGESLIMKAIGETTGRSLAVIKQDQKEI
GDLGLVAVKSRSTQPTMFKPKPLTVRGVHKGLMAIATVTGNGAQGRKVDGIKKLLSAADA
NSTGKVDITKDKGGPSEAKYIIRFLEGKLRLGLAEKTVIVALAQAVVAHEAARKGKVPST
SDIEKGESILKAVYSELPSYDVIIPAMVEHGILNLKEHCKLRPGVPLKPMLAKPTKAITE
VLDRFEGQTFTCEYKYDGERAQIHYVAKDTDEELSQSASGASKEVGRGVAAIFSRNSEDL
SKKYPDVLAKLPTWVKEDTKSFVLDCESVAWDVKEKKVLPFQQLMTRKKKDVKVEDVKVK
VCVFAFDLLYLNGKPVVEKPLRERRELLHQAFQPVEGEFAFATFMNGQELDEIQSFLDES
VKASCEGLMVKMLDGEESGYEPSKRSRNWLKIKKDYLSGVGDSLDLVVLGAYYGKGKRTS
VYGAFLLACYNPGTDTYETVCNIGTGFSEAVLEELHDSLSQIVIDRPKPFYSHSSVGQHQ
PDVWFEPRYVWEVRTADLTLSPRYKAGMKEGVDPSGEKGISLRFPRFIKVRDDKKPDEAT
TSRQVAEMYRKQESVTKSKGPAVDDDFEY
NT seq 2250 nt   +upstreamnt  +downstreamnt
atggaggatgcgccagagcccgaggccccgaaggcaagggcggctccttcgaagccccag
tcgtcacggaataaagaacctgagccggttccggccgtgaaaacggaggctgaggaggac
acgcctgagtcggcatctgaggtggaagaggaggagcttcaagacgaagaggagaagccc
gaggtggcggccaaggcgcggcagacggtccaagccagcctcaattcggatgtcaaacac
ccatatccggactggaaagccggcgagccagtgccgtacgccgcgctgtgcaagaccttc
tcgctgatcgaactcaccaccaagaggctggagatcctggcgcactgctcgctgtttctg
cgtcaggtcatgaggctaacgccggacgatctcctgccgaccgttttactcatggtcaac
aagctcgcgcctgactacgccggtattgaactgggcattggcgaatcgttgatcatgaag
gcgatcggcgagacgacgggccgcagtttagccgtcatcaagcaggaccagaaggagatc
ggggacctcggcttggtcgccgtgaagtccaggtcaacgcagccaaccatgttcaagcca
aagccgctcactgtccgaggtgtccacaaagggcttatggcaatcgccacagtaaccggc
aatggcgcacaaggaaggaaggtggacggcatcaagaagcttttgtcggcggcggatgcg
aacagcacgggcaaggtggacatcaccaaggataagggcggtccgagcgaggccaagtat
atcattcgcttccttgaaggcaagctaaggcttgggctggccgagaagacggtcattgtc
gcgcttgcgcaggctgtggtcgcgcatgaagcagccaggaagggcaaggtgccgagtacc
tctgacattgagaagggcgagtccattctcaaggcagtttacagtgagcttccgagctac
gatgtcattatccctgcgatggtggagcatggcattttgaatctcaaagagcactgcaag
ctgcggcctggcgtccccctcaagcccatgttggccaagccgaccaaggcaattacggaa
gtgctggatcgttttgagggccagaccttcacatgcgagtacaagtatgacggtgaacga
gcgcagattcactatgtcgccaaagacacggatgaagagctcagtcagtcggcgtcaggc
gcctcgaaggaggtcggccgcggcgtggcggcgatcttctcgaggaactcggaagacctc
tccaagaagtaccccgatgtgctcgccaagctccccacgtgggtgaaggaggacaccaag
agcttcgtcctcgactgcgagtcggtagcgtgggacgtgaaggagaagaaggtcctgcct
ttccagcagctcatgacgcgcaagaagaaggacgtgaaggtggaggacgtcaaagtcaag
gtgtgcgtgttcgccttcgacctgctctatctgaatggcaagccggttgtggagaagccg
ctgagggagcgccgcgaactgctccatcaggcgttccaacctgtcgagggcgagttcgcc
tttgccacgttcatgaacggccaggaactggacgagatccagtcgttcctcgatgagtcg
gttaaagcctcctgcgagggcttgatggtcaagatgttggatggcgaggagagcggatat
gagccgagcaagcggagtcgcaactggctcaagatcaaaaaagactacctctccggggtc
ggcgactccctcgatctggtcgtcctcggcgcgtactacggcaagggcaagcgcacgtcg
gtttacggcgcatttttgctggcgtgttacaaccccggcacggacacgtacgaaacagtg
tgcaacatcggcaccggtttcagcgaggccgtgctcgaggagttgcacgattcgctctcg
cagatcgtcatcgaccggcccaagcccttctattcgcacagctcggtcgggcagcaccag
cccgatgtctggttcgagccgcggtacgtgtgggaggtcaggacggcggacctgacgctc
agcccgcggtacaaggcgggcatgaaggagggcgtcgacccgagcggcgagaagggcatc
agcctgcggttcccgcgcttcatcaaggtgcgcgacgacaagaagccggacgaagcgacc
acgagcaggcaagtggccgagatgtatcgcaagcaggagagcgtgaccaagagcaagggc
ccggcggtggatgatgatttcgagtattag

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