Thermothielavioides terrestris: THITE_43808
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Entry
THITE_43808 CDS
T02228
Name
(RefSeq) SNF21-like protein
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
ttt
Thermothielavioides terrestris
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttt03021
]
THITE_43808
03036 Chromosome and associated proteins [BR:
ttt03036
]
THITE_43808
Transcription machinery [BR:
ttt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
THITE_43808
RSC complex
THITE_43808
Chromosome and associated proteins [BR:
ttt03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
THITE_43808
SWI/SNF complex
THITE_43808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
HSA
SnAC
ResIII
QLQ
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
11524501
NCBI-ProteinID:
XP_003655769
JGI:
Thite2_43808
UniProt:
G2R8Y3
LinkDB
All DBs
Position
4:complement(join(3192528..3192675,3192739..3192827,3192926..3196945,3197041..3197133))
Genome browser
AA seq
1449 aa
AA seq
DB search
MASVQLPAAVQHPGSVLPASMTQQQAQEVFMRFQQMKKQGVPSTDPEFIKTQSILAALQR
QSELRKQQLQLQQQQQQQQQQQQQQQQAMQNGANGLVNGAQPPRPAQPAAAQSTMPPATT
SLGASALPATANGSAAPANAAAPAQNQASQFTPAQLSLLWTQIKAFRMLGKNAGVPIQMQ
RAIFEHRARRRASLAAKQGPQSASVAADSETPTQDGVKSDAQGNSASVPQPKAFKTLKSP
YDGGLVRKTISYMDHGRRKNRLIIPGIFPTGIDFEQLRADREKIVFNRMSARYSELKSLP
GNLAHWDASSDVLVADDTAKRKAIIEMKKLALYSRQRALRDKIGKQMMHYDNLAMTTNRA
QYRRMKKQNVREARITEKLEKQQRDARENRQKKRHDDQMMALYNHRNEVLNAGQSQRGKM
QKLSRVMYNHHFNIEKEEQKRIERTAKQRLQALKANDEEAYLKLLDQAKDTRITHLLRQT
DGFLHQLASSVRAQQREAAERYGQDIDVPDSDEEDEEDEESSRKIDYYAVAHRIKEEVTE
QASILVGGTLKEYQLKGLQWMLSLYNNNLNGILADEMGLGKTIQTISLITYLIEKKHQNG
PYLVIVPLSTLTNWNLEFDKWAPSVAKVVYKGPPNARKMQQEKIRQGKFQVLLTTYEYII
KDRPLLSKIKWFHMIIDEGHRMKNTNSKLSATIQQYYSTRFRLILTGTPLQNNLAELWAM
LNFVLPNIFKSAKTFDEWFNTPFANTGGQDKMELTEEEQILVIRRLHKVLRPFLLRRLKK
DVEKDLPDKTEKVIKCKFSALQARLYKQMVTHQKIAVSDGKGGKTGARGLSNMIMQLRKL
CNHPFVFDEVENQMNPANVSNDLLWRTAGKFELLDRILPKYKATGHRVLMFFQMTAIMDI
MEDFLRYRGIQYLRLDGTTKSEDRSDLLKEFNRSDSPYFMFLLSTRAGGLGLNLQTADTV
IIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSASVEEKILERARFKLDMDGKVIQA
GRFDNKSSETDRDAMLRTLLETADMAESGEQEEMDDEELNMILARNEEELNIFQKLDEER
SRDPIYGTAPGCKGVPRLMAEDELPDIYLNEGNPVEEESEVLLGRGARERTKVKYDDGLT
EEQWLMAVDDDEDTPEAAAARKAARKEKREANKLKRLALLNASMENSPSASRASTEDVET
PVKKRGRKPGSKNQEKRKAEDGDDEPPAKKRRGPQGRPKAVSTGASEARLSPELREKLQK
SLRRIFDGLMNLEVDDDEPEEKPDGDKDDDDGPPKRLIIGPFVKLPPKRDWGDYYLIIAN
PICMNDIQKRIKKEEYNSLADMRKDLDLMVRNCRTFNEESSGICQDVNLIEAFFKKEFEK
ELSENPDLRALEDPSASSSSPTADGTRNTTPSGPPTRIKLVSGSSAGAANGGPVNGAGGG
SGAGQSDEE
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgtgcagttgccggctgcggtgcagcatcccggctccgtcctcccggcgagc
atgacccagcagcaggctcaggaagtattcatgagattccagcagatgaagaaacagggc
gttcccagcacagacccggagttcatcaagacccaatccattcttgccgctctccagcga
cagagcgagttgcggaagcagcagctgcagttgcagcagcaacagcagcagcagcaacag
caacaacaacaacaacagcaagcaatgcaaaatggggccaacggtctcgtcaacggagct
caacctccgcgtcctgcccagcccgcggctgcgcaatcaaccatgcctcccgcgacgaca
tcacttggcgcatctgccctgccggccaccgctaacggctctgcggcgcccgcaaatgct
gctgcaccggcgcagaaccaggccagccaattcacaccagcgcagctgagcctgctctgg
acacaaatcaaggcctttaggatgcttggtaagaacgcaggcgtcccgatccagatgcaa
agggccatcttcgagcacagggcgcgccgccgtgcatccctggccgccaagcaaggtcct
cagtccgcctcggtcgctgccgactcggagacgcctacgcaagatggtgtgaaatccgat
gcgcaaggcaactccgcgtctgttccgcagcctaaggccttcaagacactgaaatctccg
tacgacggcgggctcgttcgaaagaccatctcttatatggaccatggccggcgcaagaat
cgcctcatcattcccggcatcttcccgacaggcatcgactttgagcagctgagggccgac
cgcgagaagatcgtcttcaaccgcatgagcgcgaggtactccgagttgaagtcgctccct
ggcaacctggcgcactgggacgcctccagtgatgtcctcgtggccgacgacactgcgaag
aggaaagccatcattgagatgaagaagttggccttgtattcccggcagcgcgccctgagg
gacaagatcgggaagcagatgatgcactacgacaacctggccatgaccacgaaccgcgct
caataccgccgcatgaagaagcagaacgtccgggaagcccgcattaccgagaagctggag
aagcagcagcgcgatgcgcgcgagaaccggcagaagaagaggcatgacgaccagatgatg
gcgctttacaatcatcgcaacgaggttctcaacgccggccagagccagcgcggcaagatg
cagaagctcagccgtgtcatgtacaaccatcatttcaacatcgagaaggaagagcagaag
cggatcgagaggaccgccaagcagcgtctacaggctctcaaggccaacgacgaagaggcc
tacctcaagctgctcgaccaggccaaggatacgcgtatcactcacttgctccgtcagacc
gatggcttcctgcaccaactcgcctcctccgtccgcgcccagcagcgggaggccgccgag
cgctacggccaggacatcgatgtgcctgacagcgacgaggaggatgaagaggatgaggag
agcagccgcaagatcgactactacgccgtcgcccaccgcatcaaggaggaggtcaccgag
caggccagcatcctagttggcggcacgctgaaggagtaccagctcaagggcctgcagtgg
atgctgtcgctctacaacaacaacctgaacggtatcctggccgacgagatgggtctcggc
aagacgatccagaccatcagtttgatcacgtacctgatcgagaagaagcatcagaacggc
ccctacttggtcatcgtgccgctcagcacgcttaccaactggaacctcgagtttgacaag
tgggcgccgtcggttgccaaggtcgtgtacaagggacctcccaatgctcgcaagatgcag
caagagaagatccgccagggcaagttccaggtcttgctcacgacatacgagtacatcatc
aaggaccggccgctgctgagcaagatcaagtggttccacatgatcatcgacgagggccat
cgcatgaagaacaccaactccaagctcagcgccaccattcagcagtactacagcacccgc
ttccgccttatccttaccggtacccctctacaaaacaaccttgccgaactgtgggccatg
ctcaacttcgtcttgcccaacatcttcaaatccgccaagacgttcgacgagtggttcaac
actcccttcgccaacacgggtggccaagacaagatggaactcacggaagaagaacagatt
ctcgtcatccgtcgcctgcataaggtgctgcggccgttcttgctacgtcgcctcaagaag
gatgtcgagaaggatctccccgacaagacggagaaggtcatcaagtgcaagttctcggcc
ctgcaggctcgcctgtataagcagatggttacacaccagaagattgcagtcagcgacggc
aagggcggcaagacgggcgcccgtggcttgagcaacatgatcatgcagctccggaaactg
tgcaaccacccgttcgtgtttgacgaggtcgagaaccagatgaacccggccaatgtcagc
aacgacctcctgtggaggacggccggcaagttcgagctcctggacaggattcttcccaag
tacaaggcgacgggccatcgcgtgttgatgttcttccagatgaccgccatcatggacatc
atggaagacttcctccgataccgaggcatccagtacctccgactcgacggtaccaccaag
tcggaagaccggtccgatctgctcaaggagttcaaccggtcggattccccttatttcatg
ttcctgctttccacccgtgccggtggtctcgggttgaacttgcaaaccgccgacacggtc
atcatctacgattccgactggaatcctcaccaggatttgcaggctcaggatcgtgcgcat
cgtatcggccagaagaacgaggtgcgaatcctgcggctgatcagctctgcgtccgttgaa
gagaagatcctcgagcgcgccaggttcaagctggacatggacggcaaggtcatccaggcc
ggtcgcttcgacaacaagtcctccgagacggaccgcgatgccatgctcaggacgctcctg
gaaacggcggacatggccgaatccggcgagcaggaggagatggacgacgaagagctcaac
atgatcctcgctcggaacgaggaggagcttaacatcttccagaagctggacgaggagagg
tcgcgcgatcctatctacggcaccgctcccggctgcaagggtgtgccccgtctcatggcc
gaggacgagttgcccgatatctacctgaacgagggtaatccggtcgaagaagagtccgag
gtgttgctcggccgtggtgcccgtgagcgcaccaaggtcaagtacgacgacgggctcacg
gaggagcagtggctcatggccgtagacgacgacgaggatacgcccgaggcggcggccgcg
cggaaggcggcccgcaaggagaagcgcgaggcgaacaagctgaagcgcttggcgctgctg
aacgcttccatggagaactcgccgtccgccagccgcgctagcaccgaggatgtcgagaca
ccggtcaagaagcgcgggcgcaagccgggcagcaagaaccaggagaagcgcaaggcagaa
gacggcgacgacgaaccgcctgctaagaaacgccgcggaccgcagggacgtccgaaggca
gttagcacgggcgcgagcgaggcccgtctgtcgccggagctgcgcgagaagctgcagaag
agcctgaggcgcatctttgacgggctgatgaacctcgaggtggacgacgacgagccggag
gagaagcccgacggcgacaaggacgacgacgacgggccgccgaagcggctcatcatcggg
ccgttcgtcaagctcccgcccaagcgcgactggggcgactactacctcatcatcgccaac
ccgatctgcatgaacgacatccagaagcggataaagaaggaggagtacaacagcctggcg
gacatgcgcaaggatctcgacttgatggtcaggaactgcaggaccttcaacgaagagagc
agcggcatctgccaggatgtgaacctgatcgaggccttcttcaagaaggagttcgaaaag
gagctctcggaaaacccggacctgcgcgccctcgaggatccctccgcctcctcctcatcg
cccaccgccgacggcacccgcaacaccacgcccagcggcccgcccacgcgcatcaagctg
gtgtcgggctcgtccgcgggcgcggccaatggcgggccggtcaatggcgcgggcggcggc
agcggggcggggcagagcgacgaggagtag
DBGET
integrated database retrieval system
