Thermothielavioides terrestris: THITE_54110
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Entry
THITE_54110 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K11770
chromatin structure-remodeling complex subunit SFH1
Organism
ttt
Thermothielavioides terrestris
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttt03021
]
THITE_54110
03036 Chromosome and associated proteins [BR:
ttt03036
]
THITE_54110
Transcription machinery [BR:
ttt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
THITE_54110
Chromosome and associated proteins [BR:
ttt03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
THITE_54110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
GATA
Zn_ribbon_LapB
Motif
Other DBs
NCBI-GeneID:
11515128
NCBI-ProteinID:
XP_003653507
JGI:
Thite2_54110
UniProt:
G2QZD8
LinkDB
All DBs
Position
2:join(8619004..8620251,8620318..8620710,8620852..8620947)
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AA seq
578 aa
AA seq
DB search
MAVRSESQQAIFSSYAPRLRTYNNALLQPVLPGAAPSNPLARTTKRGTTIINYAEDGYDD
YDDDEEDSRRRPTGLRSLRRDDSAAKVDPSEKVGKDTNEPVEMQGIYRDWMGKMRPNRSD
AMNYVQACLPLTLIPIRIDLDIPAFTPLPPLVTPAPADPTHPLFKPQEPTVPYRLRDTFL
WNLHESLITTDQFATQLVQDLDLPNRASAIAEISKQIRTQLEEYAGVALHPLFHSHPSRP
NVPESSKARHDSATPGPNTAPSFSAADTPIGGSNLGGTPSKTPAPTTPAVVQTAQGEVSA
AATPIPVDTDDFSPDDTYRCIINLNINLSSQVYTDKFEWSLLHPPGTAEMFAKQTCADLG
LYGEWVPAMTHAIYEAVLKLKKEACESGGLVAGWGASAAALGGVAGAGAEFPNDAAPKLE
TLSKEEIEKREGDRERQIRRLRRETARFSSNTGMAGGLPIGFAFSGLIEQEEERMGRGER
SKKKKRFRSLSPLGRSGTPGGRGTPAGEGYGGGGTLTEAERLNWRCSHCRVWGTSVWAVR
DGPYGPRSLCNNCGFIYERDRKLPRWTKMLHAADARPF
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcgatccgagtcgcagcaggcgatcttctcgtcctacgcgccgaggttgcgc
acctacaacaacgccctgctgcagcccgtcctgccgggcgctgctccttcgaacccgctc
gcccgcaccaccaagcgcggcaccaccatcatcaactacgccgaagacggctacgacgac
tacgatgacgacgaagaagacagccgccgccggcccaccggcctgcgcagcctgcgccgc
gacgacagcgccgccaaggtcgaccccagcgagaaggtcggcaaggacacgaacgagccg
gtcgagatgcagggcatctatcgcgactggatgggcaagatgcgccccaacagatcggat
gccatgaattacgtccaggcctgtctcccgctcaccctgattcccatccgaatcgacctc
gacatacccgccttcactcccctgccgcccttggtcacccccgcgccggcggacccgacc
caccccctcttcaaacctcaggaaccgacagtaccatatcgcttgcgcgatacctttctg
tggaatctccacgagagtctgatcacgaccgaccagtttgccacccagctggttcaggat
ctcgacctgcccaaccgcgcttcggccatcgccgagatcagcaagcaaatacggacccag
ctggaggaatatgccggtgtcgccctccatccgctgttccactcgcacccgagccgcccc
aacgtccccgagtcctccaaggcgcgccacgactcggccactcccggcccgaacacggcg
ccctccttcagcgcagccgacacaccaataggcggcagcaacctcggaggcaccccgtcc
aagacgccagcaccaaccacccccgccgtggtgcagacggcccagggcgaggtatcagcg
gcagccaccccgatccccgtcgacacagacgacttcagccccgacgacacctaccggtgc
atcatcaatctcaacatcaacctgtcctcgcaagtctacaccgacaagttcgagtggtcc
ctcctgcacccgccggggacggccgagatgttcgccaagcaaacctgcgccgacctcggc
ctgtacggcgaatgggtccccgccatgacccacgcgatctacgaggccgtgctgaagctg
aagaaggaagcctgcgagtccggcgggctggtcgccggctggggcgcctccgcggccgcg
ctcggcggcgttgcgggcgccggcgccgagttccccaacgacgcggcccccaagctggag
acgctcagcaaggaggagatcgagaagcgcgagggcgaccgcgagcgccagatccgccgc
ctgcgccgcgagaccgcccgcttcagcagcaacaccggcatggccggcggcttgcccatc
ggcttcgccttctccggcctgatcgagcaggaggaggagcgcatgggccgcggggagcgg
agcaagaagaagaagcggttccggagcctgtcgccgctcggccgctcgggcacgcccggc
gggaggggcacgccggccggggaagggtacggcggcggcggcacgctgaccgaggcggag
agactgaattggcgatgctcccactgcagggtctggggcaccagtgtgtgggcggtgcgg
gacgggccgtacggtccaaggtccctctgcaacaactgcggctttatctacgagcgcgac
cgcaagctgccccgctggaccaagatgctgcacgccgccgatgcccggccgttctag
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